RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 SLC5A8Q8N695 610 aa16.9■□□□□ 0.3
CLDND1-220ENST00000508902 TANKQ92844 425 aa16.9■□□□□ 0.3
CLDND1-220ENST00000508902 OR8D2Q9GZM6 311 aa16.9■□□□□ 0.3
CLDND1-220ENST00000508902 VPS29Q9UBQ0 182 aa16.9■□□□□ 0.3
CLDND1-220ENST00000508902 SPACA6W5XKT8 324 aa16.9■□□□□ 0.3
CLDND1-220ENST00000508902 EXPH5Q8NEV8 1989 aa16.89■□□□□ 0.3
CLDND1-220ENST00000508902 USP9YO00507 2555 aaPredicted RBP16.89■□□□□ 0.3
CLDND1-220ENST00000508902 DYTNA2CJ06 578 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 CLEC18AA5D8T8 446 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 TRIM13O60858 407 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 ALOX15P16050 662 aaPredicted RBP16.89■□□□□ 0.29
CLDND1-220ENST00000508902 BUD31P41223 144 aaPredicted RBP16.89■□□□□ 0.29
CLDND1-220ENST00000508902 CLCN2P51788 898 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 CEP85LQ5SZL2 805 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 OR52E8Q6IFG1 317 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 CLEC18BQ6UXF7 455 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 C9orf40Q8IXQ3 194 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 TMEM132CQ8N3T6 1108 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 CLEC18CQ8NCF0 446 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 OR2T11Q8NH01 316 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 OR14A16Q8NHC5 309 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 GRHL3Q8TE85 626 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 SCMH1Q96GD3 660 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 PKNOX2Q96KN3 472 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 EBPLQ9BY08 206 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 DEFB126Q9BYW3 111 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 TRIM45Q9H8W5 580 aaPredicted RBP16.89■□□□□ 0.29
CLDND1-220ENST00000508902 STK38LQ9Y2H1 464 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 PCDHA9Q9Y5H5 950 aa16.89■□□□□ 0.29
CLDND1-220ENST00000508902 TRAV17A0A0B4J275 112 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 PRAMEF2O60811 474 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 UQCRHP07919 91 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 HK2P52789 917 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 MAPK12P53778 367 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 OR1C1Q15619 314 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 UGT3A2Q3SY77 523 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 CFAP157Q5JU67 520 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 RPUSD3Q6P087 351 aaKnown RBP16.88■□□□□ 0.29
CLDND1-220ENST00000508902 TRIM46Q7Z4K8 759 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 ST13P4Q8IZP2 240 aaPredicted RBP16.88■□□□□ 0.29
CLDND1-220ENST00000508902 MORN4Q8NDC4 146 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 SIMC1Q8NDZ2 872 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 SENP5Q96HI0 755 aaPredicted RBP16.88■□□□□ 0.29
CLDND1-220ENST00000508902 DGAT2Q96PD7 388 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 SMC6Q96SB8 1091 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLDND1-220ENST00000508902 TEKT2Q9UIF3 430 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 MCM8Q9UJA3 840 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 EXO1Q9UQ84 846 aaKnown RBP16.88■□□□□ 0.29
CLDND1-220ENST00000508902 CLCA3PQ9Y6N3 262 aa16.88■□□□□ 0.29
CLDND1-220ENST00000508902 RGS16O15492 202 aaPredicted RBP16.87■□□□□ 0.29
CLDND1-220ENST00000508902 PCDH7O60245 1069 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 BPGMP07738 259 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 DHRS4L1P0CG22 281 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 TIA1P31483 386 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLDND1-220ENST00000508902 TRHRP34981 398 aaPredicted RBP16.87■□□□□ 0.29
CLDND1-220ENST00000508902 TDGF1P3P51864 188 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 TAS2R50P59544 299 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 PLIN5Q00G26 463 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 BTKQ06187 659 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 MGAT2Q10469 447 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 DUSP8Q13202 625 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 KIAA0040Q15053 153 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 NR6A1Q15406 480 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 SPRED3Q2MJR0 410 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 ARL13AQ5H913 290 aaPredicted RBP16.87■□□□□ 0.29
CLDND1-220ENST00000508902 ZNF766Q5HY98 468 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 KANK2Q63ZY3 851 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 SLC48A1Q6P1K1 146 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 GALNT18Q6P9A2 607 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 PAGE2Q7Z2X7 111 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 GBP7Q8N8V2 638 aaPredicted RBP16.87■□□□□ 0.29
CLDND1-220ENST00000508902 GALNT11Q8NCW6 608 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLDND1-220ENST00000508902 DAZLQ92904 295 aaKnown RBP16.87■□□□□ 0.29
CLDND1-220ENST00000508902 ZNF681Q96N22 645 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 ZNF395Q9H8N7 513 aaPredicted RBP16.87■□□□□ 0.29
CLDND1-220ENST00000508902 SIRT5Q9NXA8 310 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 AHSPQ9NZD4 102 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 MID2Q9UJV3 735 aa16.87■□□□□ 0.29
CLDND1-220ENST00000508902 COPG1Q9Y678 874 aaKnown RBP16.87■□□□□ 0.29
CLDND1-220ENST00000508902 CCDC151A5D8V7 595 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 NPHS1O60500 1241 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 ITGA10O75578 1167 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 ZFAND5O76080 213 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 CBX6O95503 412 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 NADKO95544 446 aaPredicted RBP16.86■□□□□ 0.29
CLDND1-220ENST00000508902 TUBBP07437 444 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 IL3P08700 152 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 RNF224P0DH78 156 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 S1PR1P21453 382 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 MST1P26927 711 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 TLX1P31314 330 aaPredicted RBP16.86■□□□□ 0.29
CLDND1-220ENST00000508902 ERVK-8P63133 956 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 RNF4P78317 190 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 LYPD8Q6UX82 237 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 LRIG3Q6UXM1 1119 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 Q6ZSR9 355 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 C16orf78Q8WTQ4 265 aa16.86■□□□□ 0.29
CLDND1-220ENST00000508902 CNRIP1Q96F85 164 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms