RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 GALNT6Q8NCL4 622 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 OR4A15Q8NGL6 344 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 OR4C15Q8NGM1 316 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 PSMA8Q8TAA3 256 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 ZNF675Q8TD23 568 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 CHAC2Q8WUX2 184 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 GEMIN6Q8WXD5 167 aaKnown RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 TXNDC15Q96J42 360 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 KCNC2Q96PR1 638 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 INSM2Q96T92 566 aaPredicted RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 CDCA4Q9BXL8 241 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 BTBD1Q9H0C5 482 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 FGF22Q9HCT0 170 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 IMP3Q9NV31 184 aaKnown RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 CUEDC1Q9NWM3 386 aaPredicted RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 AASSQ9UDR5 926 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC17A4Q9Y2C5 497 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 HCN4Q9Y3Q4 1203 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 FAM32AQ9Y421 112 aaKnown RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 PCDHGA2Q9Y5H1 932 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 PRAMEF33A0A0G2JMD5 474 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 SHISA7A6NL88 538 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 LOC110117498-PIK3R3F6TDL0 507 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 AXIN1O15169 862 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 PCDH7O60245 1069 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 TNFRSF21O75509 655 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 RPN2P04844 631 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 DDX5P17844 614 aaKnown RBP10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 DRD1P21728 446 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 ETV6P41212 452 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 PIK3CBP42338 1070 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 CRATP43155 626 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 PRIM2P49643 509 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 CDC42P60953 191 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 DMPKQ09013 629 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 IRF3Q14653 427 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 HIST2H2AA3Q6FI13 130 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 PTCRAQ6ISU1 281 aaPredicted RBP10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 COMMD6Q7Z4G1 85 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 VN1R5Q7Z5H4 357 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 FAM129CQ86XR2 697 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 LYSMD2Q8IV50 215 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC44A2Q8IWA5 706 aaPredicted RBP10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 NAGSQ8N159 534 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC5A8Q8N695 610 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 NATD1Q8N6N6 113 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 PIK3R3Q92569 461 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 HPS1Q92902 700 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 APOOQ9BUR5 198 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 XKR8Q9H6D3 395 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 SIAEQ9HAT2 523 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 MOV10Q9HCE1 1003 aaKnown RBP10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 IMPAD1Q9NX62 359 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 SH3BP4Q9P0V3 963 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 ACSL5Q9ULC5 683 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 GPSM3Q9Y4H4 160 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 PCDHGA3Q9Y5H0 932 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 DNMT3AQ9Y6K1 912 aaPredicted RBP10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 TTC28Q96AY4 2481 aa10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 NUP214P35658 2090 aaPredicted RBP10.47□□□□□ -0.73
SH3RF1-203ENST00000508685 ACADMP11310 421 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 GABRB1P18505 474 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 ZNF763Q0D2J5 394 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 DNASE1L3Q13609 305 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 SCARB2Q14108 478 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 SYT16Q17RD7 645 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 TPRG1LQ5T0D9 272 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 LCTLQ6UWM7 567 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 TMIGD1Q6UXZ0 262 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 LGI4Q8N135 537 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 FLCNQ8NFG4 579 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 PROX1Q92786 737 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 RPL3LQ92901 407 aaKnown RBP10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 UBE2FQ969M7 185 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 UBE2E3Q969T4 207 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 PDXPQ96GD0 296 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 FERD3LQ96RJ6 166 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 PIP5K1AQ99755 562 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 TIMM29Q9BSF4 260 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 C1QTNF7Q9BXJ2 289 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 ALOXE3Q9BYJ1 711 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 KLHL25Q9H0H3 589 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 FBRSQ9HAH7 460 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 PRDM8Q9NQV8 689 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 CFL2Q9Y281 166 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 TSC22D4Q9Y3Q8 395 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 TESMINQ9Y4I5 508 aa10.46□□□□□ -0.73
SH3RF1-203ENST00000508685 A0A1W2PPV9 198 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 TCRBV21S2A2A0A5A6 115 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 FEZF1A0PJY2 475 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 HTR3EA5X5Y0 456 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 PDZK1P1A8MUH7 402 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 TMEM229AB2RXF0 380 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 CACNB4O00305 520 aaPredicted RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 GPR37L1O60883 481 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 TBX6O95947 436 aaPredicted RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 VIPP01282 170 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 APOA1P02647 267 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms