RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SLC16A12Q6ZSM3 486 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 CATSPER4Q7RTX7 472 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 EFL1Q7Z2Z2 1120 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 C16orf62Q7Z3J2 963 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 GPAT4Q86UL3 456 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 GATAD2AQ86YP4 633 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 RFX6Q8HWS3 928 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 CPNE9Q8IYJ1 553 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 MCOLN2Q8IZK6 566 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 METTL4Q8N3J2 472 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 EMC1Q8N766 993 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 NIPA2Q8N8Q9 360 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 TTC29Q8NA56 475 aaPredicted RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 CAMKVQ8NCB2 501 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 CDC26Q8NHZ8 85 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 TAS1R2Q8TE23 839 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SETD7Q8WTS6 366 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 DEPDC1BQ8WUY9 529 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ELMO1Q92556 727 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 LPGAT1Q92604 370 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 TCEAL3Q969E4 200 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 KIAA1143Q96AT1 154 aaPredicted RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 OTULINQ96BN8 352 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 RNF170Q96K19 258 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SLITRK1Q96PX8 696 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 RBM4BQ9BQ04 359 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 APOL2Q9BQE5 337 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 TMEM204Q9BSN7 226 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 RBM4Q9BWF3 364 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 TTLL2Q9BWV7 592 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 NUSAP1Q9BXS6 441 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SLIRPQ9GZT3 109 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 IL22Q9GZX6 179 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SEMA6AQ9H2E6 1030 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SPNS1Q9H2V7 528 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 PLEKHA5Q9HAU0 1116 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 NTN4Q9HB63 628 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SDHAF3Q9NRP4 125 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 THSD1Q9NS62 852 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 LYARQ9NX58 379 aaKnown RBP4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 BFARQ9NZS9 450 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 EXTL2Q9UBQ6 330 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 KIF25Q9UIL4 384 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF112Q9UJU3 913 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 DNPEPQ9ULA0 475 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 PCDHGB4Q9UN71 923 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 AGTPBP1Q9UPW5 1226 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 PCDHGB6Q9Y5F9 930 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 PCDHGB5Q9Y5G0 923 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SNX8Q9Y5X2 465 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 RNF215Q9Y6U7 377 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 ASTN1O14525 1302 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 SSC5DA1L4H1 1573 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 LAMB2P55268 1798 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 NUP98P52948 1817 aa4.35□□□□□ -1.71
PDLIM5-211ENST00000508531 hCG_1818297A0A087WSY0 165 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 OR6C70A6NIJ9 312 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 METTL15A6NJ78 407 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 EFCAB9A8MZ26 197 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 H7C2Y5 167 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF195O14628 629 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ORC5O43913 435 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 PRPSAP2O60256 369 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CABYRO75952 493 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CSPG5O95196 566 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CCNDBP1O95273 360 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 F9P00740 461 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 TNNC2P02585 160 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CDK1P06493 297 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ARP10275 920 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 RRASP10301 218 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 SRCP12931 536 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 TPSB2P20231 275 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 MSH3P20585 1137 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CD72P21854 359 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 S100PP25815 95 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 POU1F1P28069 291 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 SPRP35270 261 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 NUP62P37198 522 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 NR2C2P49116 596 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CCT3P49368 545 aaKnown RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 RAB13P51153 203 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CYP2J2P51589 502 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 VAMP7P51809 220 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 NKX2-5P52952 324 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ATP12AP54707 1039 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC12A3P55017 1021 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 PKNOX1P55347 436 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 SNAP25P60880 206 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 MS4A2Q01362 244 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 IFITM3Q01628 133 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 HSF2Q03933 536 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 GABPAQ06546 454 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 STX4Q12846 297 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 GRIK2Q13002 908 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 MAMLD1Q13495 774 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ASAH1Q13510 395 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 DAG1Q14118 895 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 VGLL4Q14135 290 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 EFR3AQ14156 821 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms