RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	MEIS2	O14770	477 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	MSH4	O15457	936 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	RRP8	O43159	456 aa	Known RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	LRRTM2	O43300	516 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	SLC28A2	O43868	658 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	NPHS1	O60500	1241 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	GLRA3	O75311	464 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	AKAP3	O75969	853 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	RECQL4	O94761	1208 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	PCDH8	O95206	1070 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	GADD45G	O95257	159 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	DIRAS3	O95661	229 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	AK1	P00568	194 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CSTA	P01040	98 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CALCA	P01258	141 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	IFNA6	P05013	189 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CKM	P06732	381 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	SNRNP70	P08621	437 aa	Known RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	MMP10	P09238	476 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	G6PD	P11413	515 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	ANXA3	P12429	323 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	TYR	P14679	529 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	PAX1	P15863	534 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CHRM3	P20309	590 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	UBA1	P22314	1058 aa	Known RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	RPS3	P23396	243 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	FPR3	P25089	353 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	ACVR2A	P27037	513 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	G0S2	P27469	103 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	HTR1B	P28222	390 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	PCSK1	P29120	753 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	DDT	P30046	118 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	S100A11	P31949	105 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	THBS4	P35443	961 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	GGT5	P36269	586 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	GRIA1	P42261	906 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	RPS9	P46781	194 aa	Known RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	NRIP1	P48552	1158 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	ACOT2	P49753	483 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CDKN1C	P49918	316 aa	Predicted RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	METAP2	P50579	478 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CYP2J2	P51589	502 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CCR5	P51681	352 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	PRKX	P51817	358 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	ZNF280A	P59817	542 aa	Predicted RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	RAP1A	P62834	184 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	BLOC1S1	P78537	153 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	ADARB1	P78563	741 aa	Known RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	GABPA	Q06546	454 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	OVGP1	Q12889	678 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	AQP6	Q13520	282 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	EXOSC2	Q13868	293 aa	Known RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	BAAT	Q14032	418 aa	Predicted RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	MLC1	Q15049	377 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	TAF1A	Q15573	450 aa	Predicted RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	TATDN3	Q17R31	274 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	PCGF3	Q3KNV8	242 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	VPS26B	Q4G0F5	336 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	COQ5	Q5HYK3	327 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	NHLRC3	Q5JS37	347 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	C9orf64	Q5T6V5	341 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	LAMTOR1	Q6IAA8	161 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	FRMPD2B	Q6IN97	320 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	ANKRD54	Q6NXT1	300 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	TAPT1	Q6NXT6	567 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	TSSK4	Q6SA08	328 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	DLK2	Q6UY11	383 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	FAM183BP	Q6ZVS7	135 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	USP30	Q70CQ3	517 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CCDC190	Q86UF4	302 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	SERINC5	Q86VE9	423 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CDK20	Q8IZL9	346 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	FAM185A	Q8N0U4	392 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	GUF1	Q8N442	669 aa	Known RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	RASGEF1A	Q8N9B8	481 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	SYT14	Q8NB59	555 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	ACBD4	Q8NC06	268 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CCDC54	Q8NEL0	328 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	ZNF555	Q8NEP9	628 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	OR2T34	Q8NGX1	318 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	OR2T3	Q8NH03	318 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	WDR20	Q8TBZ3	569 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	C1orf54	Q8WWF1	131 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	SELENOM	Q8WWX9	145 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	METTL21A	Q8WXB1	218 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	ASB13	Q8WXK3	278 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	AP3S1	Q92572	193 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	DPF1	Q92782	380 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	OSTF1	Q92882	214 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	GJA10	Q969M2	543 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	C3orf49	Q96BT1	292 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	YIPF6	Q96EC8	236 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	PEX11G	Q96HA9	241 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	PIWIL1	Q96J94	861 aa	Known RBP	4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	OR2A14	Q96R47	310 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	OR14A2	Q96R54	314 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	CSF3R	Q99062	836 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	AGPAT1	Q99943	283 aa		4.87	□□□□□ -1.63
TUSC3-205	ENST00000507316	SOX7	Q9BT81	388 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms