RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SLC13A2Q13183 592 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 TLR1Q15399 786 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 CEBPEQ15744 281 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 C6orf89Q6UWU4 347 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 ANKRD46Q86W74 232 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 OR4K14Q8NGD5 310 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 SUN3Q8TAQ9 357 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 NKD1Q969G9 470 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 PTCHD1Q96NR3 888 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 OR52E6Q96RD3 313 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 PRPF18Q99633 342 aaKnown RBP13.31□□□□□ -0.28
RNF4-208ENST00000507247 ATAD3AQ9NVI7 634 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 CROTQ9UKG9 612 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 MSRB2Q9Y3D2 182 aa13.31□□□□□ -0.28
RNF4-208ENST00000507247 CCT8L1PA6NM43 557 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 IDSB3KWA1 339 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 FBP2O00757 339 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 CFLARO15519 480 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 UMODP07911 640 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 CPMP14384 443 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 PRDX6P30041 224 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 PPP2R1BP30154 601 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 XKP51811 444 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 RPS18P62269 152 aaKnown RBP13.3□□□□□ -0.28
RNF4-208ENST00000507247 DNASE1L3Q13609 305 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 CYLC2Q14093 348 aaPredicted RBP13.3□□□□□ -0.28
RNF4-208ENST00000507247 MAPRE2Q15555 327 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 TGIF1Q15583 401 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 TBC1D25Q3MII6 688 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 PAGE3Q5JUK9 113 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 FAAH2Q6GMR7 532 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 SLC2A7Q6PXP3 512 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 RETREG3Q86VR2 466 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 CCDC116Q8IYX3 515 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 CLECL1Q8IZS7 167 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 PLPP5Q8NEB5 264 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 RP9Q8TA86 221 aaKnown RBP13.3□□□□□ -0.28
RNF4-208ENST00000507247 TSPEARQ8WU66 669 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 ZNF578Q96N58 590 aaPredicted RBP13.3□□□□□ -0.28
RNF4-208ENST00000507247 MESP1Q9BRJ9 268 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 ALOXE3Q9BYJ1 711 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 GLIPR2Q9H4G4 154 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 GIMAP4Q9NUV9 329 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 FAM120CQ9NX05 1096 aaKnown RBP13.3□□□□□ -0.28
RNF4-208ENST00000507247 NXT1Q9UKK6 140 aaKnown RBP13.3□□□□□ -0.28
RNF4-208ENST00000507247 ANGPTL2Q9UKU9 493 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 PSME2Q9UL46 239 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 ERVK-11Q9UQG0 969 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 ENTPD4Q9Y227 616 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 PTRH2Q9Y3E5 179 aaKnown RBP13.3□□□□□ -0.28
RNF4-208ENST00000507247 ZNF780BQ9Y6R6 833 aa13.3□□□□□ -0.28
RNF4-208ENST00000507247 A0A1W2PP18 115 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 TCRBV16S1A1N1A0A5B0 115 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 RNASET2O00584 256 aaKnown RBP13.29□□□□□ -0.28
RNF4-208ENST00000507247 UBOX5O94941 541 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 CBX6O95503 412 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 C6orf47O95873 294 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 HEXBP07686 556 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 LIPCP11150 499 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 PORP16435 677 aaPredicted RBP13.29□□□□□ -0.28
RNF4-208ENST00000507247 CSNK2A2P19784 350 aaPredicted RBP13.29□□□□□ -0.28
RNF4-208ENST00000507247 NTSP30990 170 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 DLSTP36957 453 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 EMP2P54851 167 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 PLIN5Q00G26 463 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 STX4Q12846 297 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 KRT72Q14CN4 511 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 LTB4RQ15722 352 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 CPZQ66K79 652 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 REP15Q6BDI9 236 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 DGAT2L6Q6ZPD8 337 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 MSANTD1Q6ZTZ1 278 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 LANCL3Q6ZV70 420 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 ZNF551Q7Z340 670 aaPredicted RBP13.29□□□□□ -0.28
RNF4-208ENST00000507247 LRRC25Q8N386 305 aaPredicted RBP13.29□□□□□ -0.28
RNF4-208ENST00000507247 OR2Y1Q8NGV0 311 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 AMDHD1Q96NU7 426 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 BBS4Q96RK4 519 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 INPP5KQ9BT40 448 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 CRB3Q9BUF7 120 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 SLC25A23Q9BV35 468 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 TRIM4Q9C037 500 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 SERHLQ9NQF3 203 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 C3orf18Q9UK00 162 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 TCFL5Q9UL49 500 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 FARSAQ9Y285 508 aaKnown RBP13.29□□□□□ -0.28
RNF4-208ENST00000507247 PCSK5Q92824 1860 aa13.29□□□□□ -0.28
RNF4-208ENST00000507247 KMT2BQ9UMN6 2715 aaPredicted RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 PRSS51A0A1B0GVH4 220 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 A0A1W2PRB8 838 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 DYTNA2CJ06 578 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 ALOX12BO75342 701 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 T-ENOLP0DO92 83 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 DDX5P17844 614 aaKnown RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 SOX18P35713 384 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 FOLR3P41439 243 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 CDKN2CP42773 168 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 CPA2P48052 419 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 NCBP2P52298 156 aaKnown RBP eCLIP13.28□□□□□ -0.285e-11■■■□□ 14.7
RNF4-208ENST00000507247 SERTAD2Q14140 314 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms