RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 GLYATL1Q969I3 302 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 CABS1Q96KC9 395 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 CCDC43Q96MW1 224 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 RUNDC3BQ96NL0 473 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 PRAM1Q96QH2 718 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 RPP25Q9BUL9 199 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 RBM24Q9BX46 236 aaKnown RBP3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 DPEP3Q9H4B8 488 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 DCLRE1BQ9H816 532 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 MID1IP1Q9NPA3 183 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 SPATA2Q9UM82 520 aa3.19□□□□□ -1.9
TOPBP1-204ENST00000505804 NOTCH3Q9UM47 2321 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 A0A1B0GTH9 108 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 BCLAF3A2AJT9 711 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 YJEFN3A6XGL0 299 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 RENP00797 406 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 HCKP08631 526 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 BCL3P20749 454 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 LIMK2P53671 638 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 HSPA14Q0VDF9 509 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 RPA4Q13156 261 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 CYLC2Q14093 348 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 LASP1Q14847 261 aaKnown RBP3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 CCL14Q16627 93 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 HFEQ30201 348 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 MPPE1Q53F39 396 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 ZNF774Q6NX45 483 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 Q6ZRG5 221 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 TOM1L2Q6ZVM7 507 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 TMUB2Q71RG4 321 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 CEACAM19Q7Z692 300 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 ITIH5Q86UX2 942 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 P2RY8Q86VZ1 359 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 CDC20BQ86Y33 519 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 CNTN4Q8IWV2 1026 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 PARP8Q8N3A8 854 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 SAMD12Q8N8I0 201 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 MSANTD4Q8NCY6 345 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 ICA1LQ8NDH6 482 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 CHDHQ8NE62 594 aaPredicted RBP3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 OR1K1Q8NGR3 316 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 PSMA8Q8TAA3 256 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 PNPLA2Q96AD5 504 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 C16orf58Q96GQ5 468 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 PSMB7Q99436 277 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 DCTN5Q9BTE1 182 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 FUNDC2Q9BWH2 189 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 GANQ9H2C0 597 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 SLC25A19Q9HC21 320 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 COMMD8Q9NX08 183 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 MTRRQ9UBK8 725 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 SMAD5-AS1Q9Y6J3 95 aa3.18□□□□□ -1.9
TOPBP1-204ENST00000505804 SLC28A1O00337 649 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 ATP6V1G1O75348 118 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 HPP00738 406 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 MMP10P09238 476 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 ATP6V1B1P15313 513 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 PTGER3P43115 390 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 TKTL1P51854 596 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 GEMP55040 296 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 GALK2Q01415 458 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 EMC2Q15006 297 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 HIGD2BQ4VC39 106 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 EIPR1Q53HC9 387 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 ZNF506Q5JVG8 444 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 C1orf189Q5VU69 101 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 RTL6Q6ICC9 239 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 B3GLCTQ6Y288 498 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 ZNF410Q86VK4 478 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 ERC1Q8IUD2 1116 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 FGFRL1Q8N441 504 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 SPC24Q8NBT2 197 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 OR6M1Q8NGM8 313 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 OR4F5Q8NH21 305 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 ITLN1Q8WWA0 313 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 ZNF560Q96MR9 790 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 JPH2Q9BR39 696 aaPredicted RBP3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 FAM213AQ9BRX8 229 aa3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 EIF3KQ9UBQ5 218 aaKnown RBP3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 DIMT1Q9UNQ2 313 aaKnown RBP3.17□□□□□ -1.9
TOPBP1-204ENST00000505804 ZNF840PA6NDX5 716 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 MEI4A8MW99 385 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 K7ERI5 159 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 VEGFDO43915 354 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 GPRIN2O60269 458 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 KERAO60938 352 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 SH3BGRLO75368 114 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 REC8O95072 547 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 VENTXO95231 258 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 IGHG3P01860 377 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 SFTPBP07988 381 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 MELTFP08582 738 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 CCDC159P0C7I6 412 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 MBL2P11226 248 aaPredicted RBP3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 GP9P14770 177 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 FOSL2P15408 326 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 ALDH3B1P43353 468 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 GFPT1Q06210 699 aaPredicted RBP3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 ZNF239Q16600 458 aaKnown RBP3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 PCK2Q16822 640 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms