RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 KCNS2Q9ULS6 477 aa8.76□□□□□ -1.01
SMARCAL1-213ENST00000496037 PPIEQ9UNP9 301 aaKnown RBP8.76□□□□□ -1.01
SMARCAL1-213ENST00000496037 WIF1Q9Y5W5 379 aa8.76□□□□□ -1.01
SMARCAL1-213ENST00000496037 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 CCDC162PA2VCL2 907 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 GRID2IPA4D2P6 1211 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 LRRC3CA6NJW4 275 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 MYO1CO00159 1063 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 MSTNO14793 375 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 DLX3O60479 287 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 GALR3O60755 368 aaPredicted RBP8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 SMNDC1O75940 238 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 RCBTB2O95199 551 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 MATN4O95460 622 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 SKILP12757 684 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 CYP4B1P13584 511 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 ITGA2P17301 1181 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 CHRM3P20309 590 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 IGFBP5P24593 272 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 HRH2P25021 359 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 PSMB4P28070 264 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 UGT2B10P36537 528 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 CD79BP40259 229 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 RAD52P43351 418 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 PCYT1AP49585 367 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 HK2P52789 917 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 EIF3BP55884 814 aaKnown RBP8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 ACTG1P63261 375 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 GAB1Q13480 694 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 BMPR2Q13873 1038 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 ODF1Q14990 250 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 DEFB134Q4QY38 66 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 MIDNQ504T8 468 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 PRAMEF20Q5VT98 475 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 SLC22A10Q63ZE4 541 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 CYB5R2Q6BCY4 276 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 CAVIN1Q6NZI2 390 aaKnown RBP8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 AFTPHQ6ULP2 937 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 SCIMPQ6UWF3 145 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 LINC00114Q6XXX2 140 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 LDB1Q86U70 411 aaPredicted RBP8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 GCNT2Q8N0V5 402 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 OR2C3Q8N628 320 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 TSPYL1Q9H0U9 437 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 TMEM184CQ9NVA4 438 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 R3HDM2Q9Y2K5 976 aaKnown RBP8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 DYSFO75923 2080 aa8.75□□□□□ -1.01
SMARCAL1-213ENST00000496037 LRRC10BA6NIK2 292 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 HACD1B0YJ81 288 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 CST8O60676 142 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 SASH3O75995 380 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 IGHV4-39P01824 125 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 CATP04040 527 aaKnown RBP8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 RNH1P13489 461 aaKnown RBP8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 POU2F1P14859 743 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 ALOX12P18054 663 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 CCKARP32238 428 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 GRK3P35626 688 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 CDKN1AP38936 164 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 KCNJ5P48544 419 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 SPARCL1Q14515 664 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 PRR31Q5SQ13 230 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 FAM120AOSQ5T036 256 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 E4F1Q66K89 784 aaPredicted RBP8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 VASNQ6EMK4 673 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 DENND5AQ6IQ26 1287 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 CAPN13Q6MZZ7 669 aaPredicted RBP8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 DNM1P46Q6ZS02 220 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 SH2D5Q6ZV89 423 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 TBC1D1Q86TI0 1168 aaPredicted RBP8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 FAM156AQ8NDB6 213 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 ZNF740Q8NDX6 193 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 GABPB2Q8TAK5 448 aaPredicted RBP8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 SLC44A1Q8WWI5 657 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 CAVIN3Q969G5 261 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 ANKRD9Q96BM1 317 aaPredicted RBP8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 HAUS1Q96CS2 278 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 TM4SF19Q96DZ7 209 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 ZNF597Q96LX8 424 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 SLC39A3Q9BRY0 314 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 DOHHQ9BU89 302 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 VPS11Q9H270 941 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 RHBGQ9H310 441 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 HOMER3Q9NSC5 361 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 C14orf119Q9NWQ9 140 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 AIPL1Q9NZN9 384 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 UVRAGQ9P2Y5 699 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 SLC6A5Q9Y345 797 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 MMACHCQ9Y4U1 282 aa8.74□□□□□ -1.01
SMARCAL1-213ENST00000496037 SCN3AQ9NY46 2000 aa8.73□□□□□ -1.01
SMARCAL1-213ENST00000496037 IGHV4-30-2A0A087WSY4 118 aa8.73□□□□□ -1.01
SMARCAL1-213ENST00000496037 PABPN1LA6NDY0 278 aaKnown RBP8.73□□□□□ -1.01
SMARCAL1-213ENST00000496037 H0Y3Z8 333 aa8.73□□□□□ -1.01
SMARCAL1-213ENST00000496037 C16orf97H3BN30 126 aa8.73□□□□□ -1.01
SMARCAL1-213ENST00000496037 OVOL3O00110 214 aa8.73□□□□□ -1.01
SMARCAL1-213ENST00000496037 PRMT5O14744 637 aaPredicted RBP8.73□□□□□ -1.01
SMARCAL1-213ENST00000496037 NDUFS4O43181 175 aa8.73□□□□□ -1.01
SMARCAL1-213ENST00000496037 KIAA0513O60268 411 aa8.73□□□□□ -1.01
SMARCAL1-213ENST00000496037 PLOD3O60568 738 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms