RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SEMA6AQ9H2E6 1030 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 CLK4Q9HAZ1 481 aaKnown RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 C3orf14Q9HBI5 128 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 LYRM4Q9HD34 91 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 SLC35C2Q9NQQ7 365 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 DNAJB9Q9UBS3 223 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 UTS2RQ9UKP6 389 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 POMT2Q9UKY4 750 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 EXO1Q9UQ84 846 aaKnown RBP9.71□□□□□ -0.86
HDAC3-214ENST00000495485 BTBD3Q9Y2F9 522 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 ASB4Q9Y574 426 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 SNX8Q9Y5X2 465 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 AHCTF1Q8WYP5 2266 aa9.71□□□□□ -0.86
HDAC3-214ENST00000495485 PTPRBP23467 1997 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SEC16AO15027 2179 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SUV39H1O43463 412 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 PROM1O43490 865 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 DENRO43583 198 aaKnown RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 TMPRSS11DO60235 418 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SLITRK5O94991 958 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SOX30O94993 753 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 TBX6O95947 436 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 CST1P01037 141 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF888P0CJ79 500 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 NR2F6P10588 404 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 ITGA2P17301 1181 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 PPP2R1BP30154 601 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SOX11P35716 441 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 CCT3P49368 545 aaKnown RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 PCBP4P57723 403 aaKnown RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SIM1P81133 766 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 MRPS35P82673 323 aaKnown RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 PRR5P85299 388 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 HYAL2Q12891 473 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SQSTM1Q13501 440 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 TP53BP2Q13625 1128 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 FCRL6Q6DN72 434 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 OR52E8Q6IFG1 317 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SLC48A1Q6P1K1 146 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 TMEM64Q6YI46 380 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 CBLL1Q75N03 491 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF438Q7Z4V0 828 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 AMIGO2Q86SJ2 522 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 PATL1Q86TB9 770 aaKnown RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 TMPRSS12Q86WS5 348 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SLC35F3Q8IY50 421 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 ZZZ3Q8IYH5 903 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 OR56A1Q8NGH5 318 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 OR8K5Q8NH50 307 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 PSMA8Q8TAA3 256 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 FLVCR1-AS1Q8TAF5 88 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 ADAMTS18Q8TE60 1221 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 UTP15Q8TED0 518 aaKnown RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 ADAMTS14Q8WXS8 1223 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 CIDECQ96AQ7 238 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 NEURL3Q96EH8 262 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 VPS50Q96JG6 964 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 NRTNQ99748 197 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SORBS1Q9BX66 1292 aaKnown RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 KLHL31Q9H511 634 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 TRIM45Q9H8W5 580 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-214ENST00000495485 LHX9Q9NQ69 397 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SLC6A13Q9NSD5 602 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 PILRAQ9UKJ1 303 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 FBXW2Q9UKT8 454 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 NEUROG3Q9Y4Z2 214 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 ORC6Q9Y5N6 252 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SLC22A7Q9Y694 548 aa9.7□□□□□ -0.86
HDAC3-214ENST00000495485 SPEGQ15772 3267 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 MYO1GB0I1T2 1018 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 H0YGG7 62 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 NOBOXO60393 691 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 TPST1O60507 370 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 ERAL1O75616 437 aaKnown RBP9.69□□□□□ -0.86
HDAC3-214ENST00000495485 PRKD3O94806 890 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 KLHL18O94889 574 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF682O95780 498 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 AGR2O95994 175 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 EIF2S1P05198 315 aaKnown RBP9.69□□□□□ -0.86
HDAC3-214ENST00000495485 FABP3P05413 133 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 FTH1P19P0C7X4 201 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 SMIM10L1P0DMW3 83 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF23P17027 643 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 ALOX12P18054 663 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 CAPZBP47756 277 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 NCBP2P52298 156 aaKnown RBP eCLIP9.69□□□□□ -0.861e-7■□□□□ 8.9
HDAC3-214ENST00000495485 MAPK10P53779 464 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 AQP4P55087 323 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 DSTNP60981 165 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 RAB8AP61006 207 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 ARF3P61204 181 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-214ENST00000495485 FOLH1Q04609 750 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 SCARB2Q14108 478 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 LRRC23Q53EV4 343 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-214ENST00000495485 SFT2D3Q587I9 215 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 TCTE1Q5JU00 501 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC3-214ENST00000495485 REEP3Q6NUK4 255 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 GPR155Q7Z3F1 870 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 VN1R4Q7Z5H5 301 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms