RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 GLOD5A6NK44 160 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 EFCAB8A8MWE9 144 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 HRKO00198 91 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 ZSCAN12O43309 604 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 TBX6O95947 436 aaPredicted RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 RFPL3SP0C7P2 107 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 ALOX15P16050 662 aaPredicted RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 CD22P20273 847 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 ENDOUP21128 410 aaKnown RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 SERPINB3P29508 390 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 BUD31P41223 144 aaPredicted RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 RPL21P46778 160 aaKnown RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 STT3AP46977 705 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 AGFG1P52594 562 aaKnown RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 PHEXP78562 749 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 POU4F1Q01851 419 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 FOXO1Q12778 655 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 FOXD4Q12950 439 aaPredicted RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 KEAP1Q14145 624 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 OR4D1Q15615 310 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 MPEG1Q2M385 716 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 FLYWCH1Q4VC44 716 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 TMEM35AQ53FP2 167 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 PIGGQ5H8A4 983 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 RIPPLY2Q5TAB7 128 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 HLA-DQA1Q5Y7H0 255 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 TMEM198Q66K66 360 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 TMEM64Q6YI46 380 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 SYDE1Q6ZW31 735 aaPredicted RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 ULK2Q8IYT8 1036 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 MMP21Q8N119 569 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 FBXW8Q8N3Y1 598 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 RNF175Q8N4F7 328 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 NUBPLQ8TB37 319 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 PYROXD1Q8WU10 500 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 ANKRD9Q96BM1 317 aaPredicted RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 CMTM7Q96FZ5 175 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 ZNF597Q96LX8 424 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 TMUB1Q9BVT8 246 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 MS4A8Q9BY19 250 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 ALG9Q9H6U8 611 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 POPDC3Q9HBV1 291 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 DMRT3Q9NQL9 472 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 ZNF358Q9NW07 568 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 OPTCQ9UBM4 332 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 MTRF1LQ9UGC7 380 aaKnown RBP8.87□□□□□ -0.99
UBR4-216ENST00000494503 PHF11Q9UIL8 331 aa8.87□□□□□ -0.99
UBR4-216ENST00000494503 NIPBLQ6KC79 2804 aaeCLIP8.87□□□□□ -0.992e-6■□□□□ 11.3
UBR4-216ENST00000494503 MED12Q93074 2177 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 TUBAL3A6NHL2 446 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 A6NNC1 897 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 PRAMEF4O60810 478 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 SEC31AO94979 1220 aaKnown RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 IL2RAP01589 272 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 CD1DP15813 335 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 EPB42P16452 691 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 TCP1P17987 556 aaKnown RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 KRT15P19012 456 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 IVDP26440 423 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 PEX19P40855 299 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 ASCL1P50553 236 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 ATP6V0D1P61421 351 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 MRPS25P82663 173 aaKnown RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 TNFRSF17Q02223 184 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 TBL3Q12788 808 aaKnown RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 DUSP8Q13202 625 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 POU4F3Q15319 338 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 C6orf163Q5TEZ5 329 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 PRAMEF9Q5VWM5 478 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 KHDRBS2Q5VWX1 349 aaKnown RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 C18orf63Q68DL7 685 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 OR4C11Q6IEV9 310 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 CYP20A1Q6UW02 462 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 DGAT2L6Q6ZPD8 337 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 Q71RC1 249 aaPredicted RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 LRRC70Q7Z2Q7 622 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 UBE3DQ7Z6J8 389 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 TBC1D1Q86TI0 1168 aaPredicted RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 GPR180Q86V85 440 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 CDC20BQ86Y33 519 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 TAGAPQ8N103 731 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 TNIP2Q8NFZ5 429 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 NEIL3Q8TAT5 605 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 ZNF473Q8WTR7 871 aaKnown RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 RIT1Q92963 219 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 RGMAQ96B86 450 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 HSPBAP1Q96EW2 488 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 TRIB1Q96RU8 372 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 MTERF1Q99551 399 aaKnown RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 YIPF4Q9BSR8 244 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 CD244Q9BZW8 370 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 WWTR1Q9GZV5 400 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 GSX1Q9H4S2 264 aaPredicted RBP8.86□□□□□ -0.99
UBR4-216ENST00000494503 WDR41Q9HAD4 459 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 SAYSD1Q9NPB0 183 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 SMYD2Q9NRG4 433 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 RASSF1Q9NS23 344 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 MS4A12Q9NXJ0 267 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 CNIH4Q9P003 139 aa8.86□□□□□ -0.99
UBR4-216ENST00000494503 SNX24Q9Y343 169 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms