RNA–Protein interactions for RNA: ENST00000490633.1

LAMTOR4-211, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, human

TSL 3

Gene LAMTOR4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMTOR4-211	ENST00000490633	CCDC166	P0CW27	439 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	PCNA	P12004	261 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	COX7A2	P14406	83 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CD1D	P15813	335 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ASCL1	P50553	236 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	DGKQ	P52824	942 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	HERVK_113	P63132	956 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ERVK-8	P63133	956 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ADAM8	P78325	824 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	HSPB2	Q16082	182 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ACSF3	Q4G176	576 aa	Predicted RBP	12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SULT1C3	Q6IMI6	304 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	POMZP3	Q6PJE2	187 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	PAMR1	Q6UXH9	720 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	TMEM64	Q6YI46	380 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	PDPR	Q8NCN5	879 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	BBOF1	Q8ND07	529 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	GOT1L1	Q8NHS2	421 aa	Predicted RBP	12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ALPK1	Q96QP1	1244 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SMR3A	Q99954	134 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ERVK-6	Q9BXR3	956 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	TRIM31	Q9BZY9	425 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ROGDI	Q9GZN7	287 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	OR51B5	Q9H339	312 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CNOT10	Q9H9A5	744 aa	Known RBP	12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CD274	Q9NZQ7	290 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	PTBP2	Q9UKA9	531 aa	Known RBP	12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ERVK-19	Q9WJR5	959 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SPACA6	W5XKT8	324 aa		12.81	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CXorf49	A8MYA2	514 aa	Predicted RBP	12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	FAM47E-STBD1	D6RA91	191 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	DVL2	O14641	736 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	FBXO45	P0C2W1	286 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	DRD2	P14416	443 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	GDF1	P27539	372 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	AGFG1	P52594	562 aa	Known RBP	12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ZNF136	P52737	540 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SLC12A2	P55011	1212 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	HNRNPH2	P55795	449 aa	Known RBP	12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CRYZ	Q08257	329 aa	Known RBP	12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	DUSP8	Q13202	625 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SLAMF1	Q13291	335 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	DDX39B	Q13838	428 aa	Known RBP	12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	AP5B1	Q2VPB7	878 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	PAGE2B	Q5JRK9	111 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	BICRAL	Q6AI39	1079 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633		Q71RC1	249 aa	Predicted RBP	12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	LIX1	Q8N485	282 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SRFBP1	Q8NEF9	429 aa	Known RBP	12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	WFDC11	Q8NEX6	87 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	FAM222B	Q8WU58	562 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	RNASE6	Q93091	150 aa	Known RBP	12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	FBXL20	Q96IG2	436 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	KRT12	Q99456	494 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	DOHH	Q9BU89	302 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	PHACTR1	Q9C0D0	580 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	RPF2	Q9H7B2	306 aa	Known RBP	12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ACKR4	Q9NPB9	350 aa		12.8	□□□□□ -0.36
LAMTOR4-211	ENST00000490633		E7ESA3	106 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SEC31A	O94979	1220 aa	Known RBP	12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CLPS	P04118	112 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ALOX15	P16050	662 aa	Predicted RBP	12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CEACAM8	P31997	349 aa	Predicted RBP	12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	PLIN5	Q00G26	463 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	DR1	Q01658	176 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	POU4F1	Q01851	419 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	TNFRSF17	Q02223	184 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	LAPTM5	Q13571	262 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	E2F2	Q14209	437 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ZNF267	Q14586	743 aa	Predicted RBP	12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	EBP	Q15125	230 aa	Known RBP	12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	TBCC	Q15814	346 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	HIST2H2AC	Q16777	129 aa	Predicted RBP	12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	FBXL19-AS1	Q494R0	122 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	HIST2H2AA3	Q6FI13	130 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	MED27	Q6P2C8	311 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SLC15A4	Q8N697	577 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	UCN3	Q969E3	161 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ZNF597	Q96LX8	424 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CD244	Q9BZW8	370 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	WWTR1	Q9GZV5	400 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CNIH4	Q9P003	139 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	RNF112	Q9ULX5	631 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SLC6A5	Q9Y345	797 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	PCDHGB3	Q9Y5G1	929 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	FREM3	P0C091	2139 aa		12.79	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	NIN	Q8N4C6	2090 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633		A0A1W2PS29	197 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	GLOD5	A6NK44	160 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CES2	O00748	559 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	PLPP1	O14494	284 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	TRIM3	O75382	744 aa	Predicted RBP	12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ATE1	O95260	518 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	ACSL3	O95573	720 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	EPPIN	O95925	133 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SERPINB3	P29508	390 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	SSTR1	P30872	391 aa		12.78	□□□□□ -0.36
LAMTOR4-211	ENST00000490633	CASP2	P42575	452 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms