RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 EIF3EP60228 445 aaKnown RBP13.58□□□□□ -0.24
UFD1-209ENST00000489406 MYL5Q02045 173 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 NRF1Q16656 503 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 CR1LQ2VPA4 569 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 ENPP6Q6UWR7 440 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 BBS12Q6ZW61 710 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 PACS2Q86VP3 889 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 C9orf40Q8IXQ3 194 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 ZNF595Q8IYB9 648 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 DND1Q8IYX4 353 aaKnown RBP13.58□□□□□ -0.24
UFD1-209ENST00000489406 BANPQ8N9N5 519 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 NUBPLQ8TB37 319 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 ZFAND2BQ8WV99 257 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 ASB11Q8WXH4 323 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 MSI2Q96DH6 328 aaKnown RBP13.58□□□□□ -0.24
UFD1-209ENST00000489406 TRAF4Q9BUZ4 470 aaPredicted RBP13.58□□□□□ -0.24
UFD1-209ENST00000489406 HSD3B7Q9H2F3 369 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 SPNS1Q9H2V7 528 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 OCEL1Q9H607 264 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 FETUBQ9UGM5 382 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 ZFP69BQ9UJL9 534 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 RIMKLBQ9ULI2 386 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 B3GALT5Q9Y2C3 310 aa13.58□□□□□ -0.24
UFD1-209ENST00000489406 A0A0G2JN53 185 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 EIF3FO00303 357 aaPredicted RBP13.57□□□□□ -0.24
UFD1-209ENST00000489406 SPOPO43791 374 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 SNX4O95219 450 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 FTCDO95954 541 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 CGAP01215 116 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 CD8AP01732 235 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 PPP3CBP16298 524 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 ADRA1DP25100 572 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 GMPRP36959 345 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 SRP14P37108 136 aaKnown RBP13.57□□□□□ -0.24
UFD1-209ENST00000489406 RAB38P57729 211 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 STX4Q12846 297 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 TOR1AIP1Q5JTV8 583 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 OR2A2Q6IF42 318 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 TREML4Q6UXN2 200 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 TRIM42Q8IWZ5 723 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 LRRC17Q8N6Y2 441 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 ZNF525Q8N782 197 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 PRELID2Q8N945 189 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 CTHRC1Q96CG8 243 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 C11orf24Q96F05 449 aaPredicted RBP13.57□□□□□ -0.24
UFD1-209ENST00000489406 HEY2Q9UBP5 337 aa13.57□□□□□ -0.24
UFD1-209ENST00000489406 MRPS33Q9Y291 106 aaKnown RBP13.57□□□□□ -0.24
UFD1-209ENST00000489406 GAS8O95995 478 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 CD8BP10966 210 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 NPPBP16860 134 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 PTNP21246 168 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 SAT1P21673 171 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 COMTP21964 271 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 PTPN6P29350 595 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 SLC1A1P43005 524 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 CDH17Q12864 832 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 NAE1Q13564 534 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 NTRK2Q16620 822 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 KBTBD12Q3ZCT8 623 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 AGTRAPQ6RW13 159 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 LCTLQ6UWM7 567 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 TMEM64Q6YI46 380 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 LINC00523Q86TU6 105 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 TBC1D19Q8N5T2 526 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 OTUD6BQ8N6M0 293 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 ABHD11Q8NFV4 315 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 SEMA6DQ8NFY4 1073 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 OR4K1Q8NGD4 311 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 FAM168AQ92567 244 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 HTRA1Q92743 480 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 AICDAQ9GZX7 198 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 NUP62CLQ9H1M0 184 aa13.56□□□□□ -0.24
UFD1-209ENST00000489406 TEX10Q9NXF1 929 aaPredicted RBP13.56□□□□□ -0.24
UFD1-209ENST00000489406 SYNDIG1LA6NDD5 238 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 FAM157AC9JC47 383 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 E5RI56 91 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 CTNSO60931 367 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 SCTRP47872 440 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 FBXW4P57775 412 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 CUL1Q13616 776 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 ZNF672Q499Z4 452 aaPredicted RBP13.55□□□□□ -0.24
UFD1-209ENST00000489406 MBOAT1Q6ZNC8 495 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 UBE2R2Q712K3 238 aaPredicted RBP13.55□□□□□ -0.24
UFD1-209ENST00000489406 STRA8Q7Z7C7 330 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 CILP2Q8IUL8 1156 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 RCOR2Q8IZ40 523 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 ANKRD53Q8N9V6 530 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 FAR2Q96K12 515 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 GAL3ST4Q96RP7 486 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 CSF3RQ99062 836 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 PROCRQ9UNN8 238 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 CRYL1Q9Y2S2 319 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 TCAF1Q9Y4C2 921 aa13.55□□□□□ -0.24
UFD1-209ENST00000489406 H3BMM5 538 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 TP53I11O14683 189 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 PSMD3O43242 534 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 EMC8O43402 210 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 HCRTR2O43614 444 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 TGFAP01135 160 aa13.54□□□□□ -0.24
UFD1-209ENST00000489406 TMEM253P0C7T8 217 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms