RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 IGHV3-13P01766 116 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 GBAP04062 536 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 RPLP0P05388 317 aaKnown RBP3.58□□□□□ -1.84
ITGB1-214ENST00000488427 CD59P13987 128 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 GOT1P17174 413 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 ADRA2CP18825 462 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 AOC1P19801 751 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 CTNNA2P26232 953 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 NDST2P52849 883 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 RIPPLY3P57055 190 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 PAX8Q06710 450 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 CETN1Q12798 172 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 TRA2AQ13595 282 aaKnown RBP eCLIP3.58□□□□□ -1.84
ITGB1-214ENST00000488427 KIAA0141Q14154 515 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-214ENST00000488427 LY6DQ14210 128 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 FAM189A2Q15884 450 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 SNAI3Q3KNW1 292 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 ALDH1L2Q3SY69 923 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 GDPGP1Q6ZNW5 385 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 MSANTD1Q6ZTZ1 278 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 C15orf52Q6ZUT6 534 aaKnown RBP3.58□□□□□ -1.84
ITGB1-214ENST00000488427 FAM131BQ86XD5 332 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 CROCCP3Q8IVE0 287 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 AQP11Q8NBQ7 271 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 OR52B6Q8NGF0 335 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 RPLP0P6Q8NHW5 317 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 MIPOL1Q8TD10 442 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 ATP8B4Q8TF62 1192 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 HEXDCQ8WVB3 486 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 ARNTL2Q8WYA1 636 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 ZBED3Q96IU2 234 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-214ENST00000488427 PARLQ9H300 379 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 TUBB1Q9H4B7 451 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 SP140LQ9H930 580 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.58□□□□□ -1.84
ITGB1-214ENST00000488427 KLK11Q9UBX7 282 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 BAIAP2L1Q9UHR4 511 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 CSAG2Q9Y5P2 127 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 PTPRSQ13332 1948 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 ATG2AQ2TAZ0 1938 aa3.58□□□□□ -1.84
ITGB1-214ENST00000488427 CLRN2A0PK11 232 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 RNF103O00237 685 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 IFIT3O14879 490 aaKnown RBP3.57□□□□□ -1.84
ITGB1-214ENST00000488427 INPP4BO15327 924 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 UFL1O94874 794 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 POP4O95707 220 aaKnown RBP3.57□□□□□ -1.84
ITGB1-214ENST00000488427 GATA1P15976 413 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-214ENST00000488427 CYP2B6P20813 491 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 SSTR1P30872 391 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 OR1D5P58170 312 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 LMO4P61968 165 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 UPP1Q16831 310 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.57□□□□□ -1.84
ITGB1-214ENST00000488427 SUSD4Q5VX71 490 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 TCEAL6Q6IPX3 200 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 FAM166AQ6J272 317 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 CASC4Q6P4E1 433 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 ANKRD33Q7Z3H0 272 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 PPP1R42Q7Z4L9 355 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 NLRC5Q86WI3 1866 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 CATSPER3Q86XQ3 398 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 NME8Q8N427 588 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 OR9Q2Q8NGE9 314 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 OR5M9Q8NGP3 310 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 SPPL2AQ8TCT8 520 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 DEPDC1BQ8WUY9 529 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 PCDHB18PQ96TA0 734 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 CHCHD5Q9BSY4 110 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 RPP25Q9BUL9 199 aaKnown RBP3.57□□□□□ -1.84
ITGB1-214ENST00000488427 RBM24Q9BX46 236 aaKnown RBP3.57□□□□□ -1.84
ITGB1-214ENST00000488427 RAB11FIP5Q9BXF6 653 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 DPEP2Q9H4A9 486 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 NOTCH3Q9UM47 2321 aa3.57□□□□□ -1.84
ITGB1-214ENST00000488427 DMXL2Q8TDJ6 3036 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 FBN2P35556 2912 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 UBN2Q6ZU65 1347 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 SALL1Q9NSC2 1324 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 TRIM49BA6NDI0 452 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 EPM2AB3EWF7 344 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 E5RGE8 158 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 PGRMC2O15173 223 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 SCO2O43819 266 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 FCGR3BO75015 233 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 RAD51DO75771 328 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 GRAP2O75791 330 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 TIMP1P01033 207 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 CA3P07451 260 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 ADORA3P0DMS8 318 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 CASTP20810 708 aaKnown RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 RPL9P32969 192 aaKnown RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 SLC1A3P43003 542 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 NPBWR1P48145 328 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 ARMCX4Q5H9R4 360 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 FAM46CQ5VWP2 391 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 SPATA19Q7Z5L4 167 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 FAM219AQ8IW50 185 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 PHC2Q8IXK0 858 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 ZNF444Q8N0Y2 327 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 ELMOD1Q8N336 334 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 SPEM1Q8N4L4 309 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms