RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 PFKFB4Q16877 469 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 MROH9Q5TGP6 573 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 SLC22A10Q63ZE4 541 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 RTL6Q6ICC9 239 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 ADGRD1Q6QNK2 874 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 MYLK4Q86YV6 388 aaPredicted RBP11.26□□□□□ -0.61
VPS16-208ENST00000487461 ZCCHC7Q8N3Z6 543 aaKnown RBP11.26□□□□□ -0.61
VPS16-208ENST00000487461 OR5M3Q8NGP4 307 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 RHEBL1Q8TAI7 183 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 UCN3Q969E3 161 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 MRRFQ96E11 262 aaKnown RBP11.26□□□□□ -0.61
VPS16-208ENST00000487461 GPR78Q96P69 363 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 TTYH2Q9BSA4 534 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 ZNF717Q9BY31 904 aaPredicted RBP11.26□□□□□ -0.61
VPS16-208ENST00000487461 PROK2Q9HC23 129 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 DMRT3Q9NQL9 472 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 MS4A12Q9NXJ0 267 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 TSC22D4Q9Y3Q8 395 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 ASB4Q9Y574 426 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 ANGPTL3Q9Y5C1 460 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 FAM215AQ9Y5M1 114 aa11.26□□□□□ -0.61
VPS16-208ENST00000487461 AKAP9Q99996 3911 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 A0A087X1B8 175 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 A0A1W2PR48 441 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 GLOD5A6NK44 160 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 SYCE1LA8MT33 242 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 AQP7O14520 342 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 BCKDKO14874 412 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 KLK8O60259 260 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 EEDO75530 441 aaKnown RBP11.25□□□□□ -0.61
VPS16-208ENST00000487461 GPR75O95800 540 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 RFPL3SP0C7P2 107 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 GLI4P10075 376 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 ALOX15P16050 662 aaPredicted RBP11.25□□□□□ -0.61
VPS16-208ENST00000487461 PTX3P26022 381 aaPredicted RBP11.25□□□□□ -0.61
VPS16-208ENST00000487461 MSX1P28360 303 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 TLX1P31314 330 aaPredicted RBP11.25□□□□□ -0.61
VPS16-208ENST00000487461 CASQ1P31415 396 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 BSGP35613 385 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 TNFRSF17Q02223 184 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 SETDB1Q15047 1291 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 TESK1Q15569 626 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 LIPJQ5W064 366 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 MRM1Q6IN84 353 aaKnown RBP11.25□□□□□ -0.61
VPS16-208ENST00000487461 LIX1LQ8IVB5 337 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 DMRTC2Q8IXT2 367 aaPredicted RBP11.25□□□□□ -0.61
VPS16-208ENST00000487461 SLC15A4Q8N697 577 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 OR10Q1Q8NGQ4 319 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 PAQR8Q8TEZ7 354 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 FBXL20Q96IG2 436 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 CNPPD1Q9BV87 410 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 RAB17Q9H0T7 212 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 PHF11Q9UIL8 331 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 ACAD8Q9UKU7 415 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 RNF11Q9Y3C5 154 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 PCDHGA11Q9Y5H2 935 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.25□□□□□ -0.61
VPS16-208ENST00000487461 SPG11Q96JI7 2443 aa11.25□□□□□ -0.61
VPS16-208ENST00000487461 A0A0A6YYD5 115 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 IQANK1A0A1B0GTG1 560 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 H0YIV9 168 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 DYRK3O43781 588 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 TMPRSS11DO60235 418 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 SUSD5O60279 629 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 KRT38O76015 456 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 HOXD4P09016 255 aaPredicted RBP11.24□□□□□ -0.61
VPS16-208ENST00000487461 GFAPP14136 432 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 ENDOUP21128 410 aaKnown RBP11.24□□□□□ -0.61
VPS16-208ENST00000487461 MAN2A2P49641 1150 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 NEK2P51955 445 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 ARFIP1P53367 373 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 ALDH18A1P54886 795 aaKnown RBP11.24□□□□□ -0.61
VPS16-208ENST00000487461 RIPPLY3P57055 190 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 HERVK_113P63132 956 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 ERVK-8P63133 956 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 PLIN5Q00G26 463 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 SLC7A5Q01650 507 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 GTF2H2Q13888 395 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 ZNF267Q14586 743 aaPredicted RBP11.24□□□□□ -0.61
VPS16-208ENST00000487461 ACAP2Q15057 778 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 PCBP2Q15366 365 aaKnown RBP eCLIP11.24□□□□□ -0.61
VPS16-208ENST00000487461 CPSF6Q16630 551 aaKnown RBP eCLIP11.24□□□□□ -0.61
VPS16-208ENST00000487461 FAM83EQ2M2I3 478 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 GTF2H2CQ6P1K8 395 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 B3GNT6Q6ZMB0 384 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 CCDC91Q7Z6B0 441 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 CDH24Q86UP0 819 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 ST13P4Q8IZP2 240 aaPredicted RBP11.24□□□□□ -0.61
VPS16-208ENST00000487461 C17orf53Q8N3J3 647 aaPredicted RBP11.24□□□□□ -0.61
VPS16-208ENST00000487461 L3MBTL4Q8NA19 623 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 WDR20Q8TBZ3 569 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 SLC22A8Q8TCC7 542 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 SPACA9Q96E40 222 aaPredicted RBP11.24□□□□□ -0.61
VPS16-208ENST00000487461 CENPKQ9BS16 269 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 ERVK-6Q9BXR3 956 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 LDAHQ9H6V9 325 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 DDX31Q9H8H2 851 aaKnown RBP11.24□□□□□ -0.61
VPS16-208ENST00000487461 IPPKQ9H8X2 491 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 ACTR8Q9H981 624 aa11.24□□□□□ -0.61
VPS16-208ENST00000487461 SNX15Q9NRS6 342 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms