RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 OR10H5Q8NGA6 315 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 GPR150Q8NGU9 434 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 ARRDC2Q8TBH0 407 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 FAR1Q8WVX9 515 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 DNAJA4Q8WW22 397 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 LURAP1Q96LR2 239 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 TRNT1Q96Q11 434 aaKnown RBP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 VPS35Q96QK1 796 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 GAL3ST4Q96RP7 486 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 CYTH2Q99418 400 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 WDR77Q9BQA1 342 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 HEMGNQ9BXL5 484 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 GPR61Q9BZJ8 451 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 SLC26A1Q9H2B4 701 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 RHBGQ9H310 441 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 MAGEE1Q9HCI5 957 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 MRPL47Q9HD33 250 aaKnown RBP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 TREM1Q9NP99 234 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 IMP3Q9NV31 184 aaKnown RBP6.45□□□□□ -1.38
HDAC3-209ENST00000486618 NDUFAF4Q9P032 175 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 CAPN11Q9UMQ6 739 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 NTNG1Q9Y2I2 539 aa6.45□□□□□ -1.38
HDAC3-209ENST00000486618 SPG11Q96JI7 2443 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PDZD2O15018 2839 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 GOLGA8QA0A0J9YX86 632 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 A0A1W2PQ09 198 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 A0A1W2PQJ5 194 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 GOLGA8OA6NCC3 632 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 MFSD2BA6NFX1 497 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 SLC22A31A6NKX4 558 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TMEM150CB9EJG8 249 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 E7EQ34 232 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 GOLGA8NF8WBI6 632 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 POP7O75817 140 aaKnown RBP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 AKR7A3O95154 331 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 HPXP02790 462 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TUBB4AP04350 444 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 STSP08842 583 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 ZCCHC18P0CG32 403 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 ERVK-10P10266 1014 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 COX6B1P14854 86 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 DDX5P17844 614 aaKnown RBP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 IL1R2P27930 398 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 NDUFS1P28331 727 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TRHRP34981 398 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 CA5AP35218 305 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 GCKP35557 465 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 FOLR3P41439 243 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TSFMP43897 325 aaKnown RBP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 SEC24CP53992 1094 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 GALNT2Q10471 571 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TBL3Q12788 808 aaKnown RBP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PIGHQ14442 188 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 KRT33BQ14525 404 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 IHHQ14623 411 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PTCHD3Q3KNS1 767 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 DPCR1Q3MIW9 517 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TTMPQ5BVD1 217 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 VWA2Q5GFL6 755 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PRAMEF17Q5VTA0 474 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 FAM69BQ5VUD6 431 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 MLIPQ5VWP3 458 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 B3GNTL1Q67FW5 361 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 HEPHL1Q6MZM0 1159 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 FAM180AQ6UWF9 173 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 SLC15A3Q8IY34 581 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 GPR135Q8IZ08 494 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 OR1L3Q8NH93 324 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 DNAJB14Q8TBM8 379 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 GRHL3Q8TE85 626 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PPP4R1Q8TF05 950 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 UBLCP1Q8WVY7 318 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 ASZ1Q8WWH4 475 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PGM2Q96G03 612 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TMEM68Q96MH6 324 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TRAPPC9Q96Q05 1148 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PANX2Q96RD6 677 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 NEU1Q99519 415 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 ZBTB18Q99592 522 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TLR10Q9BXR5 811 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 EXO5Q9H790 373 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PALMDQ9NP74 551 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 P4HTMQ9NXG6 502 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 TAS2R14Q9NYV8 317 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 DTLQ9NZJ0 730 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PSMD13Q9UNM6 376 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 SHOC2Q9UQ13 582 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 PTRH2Q9Y3E5 179 aaKnown RBP6.44□□□□□ -1.38
HDAC3-209ENST00000486618 GPR45Q9Y5Y3 372 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 COLEC10Q9Y6Z7 277 aa6.44□□□□□ -1.38
HDAC3-209ENST00000486618 MACROD2A1Z1Q3 448 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 GSAPA4D1B5 854 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 PRR23D1E9PI22 279 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 RGS13O14921 159 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 PRPF4O43172 522 aaKnown RBP eCLIP6.43□□□□□ -1.38
HDAC3-209ENST00000486618 ZNF749O43361 778 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 JRKO75564 520 aa6.43□□□□□ -1.38
HDAC3-209ENST00000486618 CTAG2O75638 210 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms