RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 TNNI3P19429 210 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 PRPH2P23942 346 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 NXNQ6DKJ4 435 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 OR52E8Q6IFG1 317 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 SLC48A1Q6P1K1 146 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 MED25Q71SY5 747 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 TICAM1Q8IUC6 712 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 CRLF3Q8IUI8 442 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 KRTCAP2Q8N6L1 136 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 ADAMTS18Q8TE60 1221 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 PTPMT1Q8WUK0 201 aaPredicted RBP11.1□□□□□ -0.63
APTX-227ENST00000485479 CNRIP1Q96F85 164 aaPredicted RBP11.1□□□□□ -0.63
APTX-227ENST00000485479 IMMP1LQ96LU5 166 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 MAGEB18Q96M61 343 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 FER1L6-AS2Q96M78 137 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 CATSPER2Q96P56 530 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 OR52B2Q96RD2 323 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 MEAF6Q9HAF1 191 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 PFDN4Q9NQP4 134 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 C19orf25Q9UFG5 118 aaPredicted RBP11.1□□□□□ -0.63
APTX-227ENST00000485479 CES1P1Q9UKY3 287 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.1□□□□□ -0.63
APTX-227ENST00000485479 CSAG2Q9Y5P2 127 aa11.1□□□□□ -0.63
APTX-227ENST00000485479 C1orf226A1L170 272 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 A8MUI8 341 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 ZNF195O14628 629 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 HDAC3O15379 428 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 ATP8B1O43520 1251 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 OR10H2O60403 315 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 DIAPH2O60879 1101 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 PRB1P04280 392 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 ALDOCP09972 364 aaKnown RBP11.09□□□□□ -0.63
APTX-227ENST00000485479 PIK3R1P27986 724 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 CD97P48960 835 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 XKP51811 444 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 SLC26A5P58743 744 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 MRPS35P82673 323 aaKnown RBP11.09□□□□□ -0.63
APTX-227ENST00000485479 ZNF385BQ569K4 471 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 LINC00696Q6ZRV3 163 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 NCLNQ969V3 563 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 CIDECQ96AQ7 238 aaPredicted RBP11.09□□□□□ -0.63
APTX-227ENST00000485479 PPP3R2Q96LZ3 170 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 DGAT2Q96PD7 388 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 CNPPD1Q9BV87 410 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 FAM117AQ9C073 453 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 ATP13A2Q9NQ11 1180 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 RIC8BQ9NVN3 520 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 ZNF223Q9UK11 482 aaPredicted RBP11.09□□□□□ -0.63
APTX-227ENST00000485479 TP53TG5Q9Y2B4 290 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 CLCA3PQ9Y6N3 262 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 USH1CQ9Y6N9 552 aa11.09□□□□□ -0.63
APTX-227ENST00000485479 SAGE2PA6NJ88 616 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 GPR75O95800 540 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 ITGB2P05107 769 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 AIMP2Q13155 320 aaKnown RBP11.08□□□□□ -0.64
APTX-227ENST00000485479 FAM71E1Q6IPT2 247 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 RNF165Q6ZSG1 346 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 CCDC116Q8IYX3 515 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 APCDD1LQ8NCL9 501 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 OR7A2PQ8NGA2 310 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 OR4K14Q8NGD5 310 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 FAM76AQ8TAV0 307 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.08□□□□□ -0.648e-6■□□□□ 10.5
APTX-227ENST00000485479 TANKQ92844 425 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 C7orf26Q96N11 449 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 CCT7Q99832 543 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 TUBB6Q9BUF5 446 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 SLC25A23Q9BV35 468 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 FAIM2Q9BWQ8 316 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 NPHS2Q9NP85 383 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 ADAP2Q9NPF8 381 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 SLAMF7Q9NQ25 335 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 MIEF1Q9NQG6 463 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 ANKRD10Q9NXR5 420 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 LUZP4Q9P127 313 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 VTI1BQ9UEU0 232 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 DCTN4Q9UJW0 460 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 RELNP78509 3460 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 CNTRLQ7Z7A1 2325 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 CPMP14384 443 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 ALOX15P16050 662 aaPredicted RBP11.08□□□□□ -0.64
APTX-227ENST00000485479 DDCP20711 480 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 NT5EP21589 574 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 SSTR4P31391 388 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 RRADP55042 308 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 ERVK-8P63133 956 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 PLIN5Q00G26 463 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 ZNF267Q14586 743 aaPredicted RBP11.08□□□□□ -0.64
APTX-227ENST00000485479 HEPACAMQ14CZ8 416 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 FAM111BQ6SJ93 734 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 LARP4Q71RC2 724 aaKnown RBP eCLIP11.08□□□□□ -0.64
APTX-227ENST00000485479 APLFQ8IW19 511 aaPredicted RBP11.08□□□□□ -0.64
APTX-227ENST00000485479 NFAM1Q8NET5 270 aaPredicted RBP11.08□□□□□ -0.64
APTX-227ENST00000485479 OR9A2Q8NGT5 310 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 RFWD2Q8NHY2 731 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 SLC2A12Q8TD20 617 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 PSMF1Q92530 271 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 RBM18Q96H35 190 aaKnown RBP11.08□□□□□ -0.64
APTX-227ENST00000485479 FCRL1Q96LA6 429 aa11.08□□□□□ -0.64
APTX-227ENST00000485479 IP6K3Q96PC2 410 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms