RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 TLR4O00206 839 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 EEF2KO00418 725 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 CHUKO15111 745 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 DCXO43602 365 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 GMNNO75496 209 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 CXCL10P02778 98 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 SP1P08047 785 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 FRMD6-AS1P0C7T7 363 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 CT45A8P0DMV1 189 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 CT45A9P0DMV2 189 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 RPL35AP18077 110 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 ALDH1B1P30837 517 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 SRD5A2P31213 254 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 CCR4P51679 360 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 CNN1P51911 297 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 SRP54P61011 504 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 PHEXP78562 749 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 CDKL1Q00532 357 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 GCNT1Q02742 428 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 SRSF9Q13242 221 aaKnown RBP eCLIP3.44□□□□□ -1.86
VPS8-223ENST00000485024 CDH18Q13634 790 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 DPYSQ14117 519 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 SQLEQ14534 574 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 CARTPTQ16568 116 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 ZNF718Q3SXZ3 478 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 FASTKD1Q53R41 847 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 CT45A2Q5DJT8 189 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 HERC4Q5GLZ8 1057 aaPredicted RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 FAM72AQ5TYM5 149 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 FAM72DQ6L9T8 149 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 ZNF790Q6PG37 636 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 C19orf48Q6RUI8 117 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 MEX3BQ6ZN04 569 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 TRMT1LQ7Z2T5 733 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 TRMT11Q7Z4G4 463 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 TRPT1Q86TN4 253 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 NLRP14Q86W24 1093 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 FAM72BQ86X60 149 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 ELMOD2Q8IZ81 293 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 ARL6IP6Q8N6S5 226 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 SMYD1Q8NB12 490 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 KLHDC9Q8NEP7 349 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 OR10G8Q8NGN5 311 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 OR13C5Q8NGS8 318 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 OR1L3Q8NH93 324 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 HPSE2Q8WWQ2 592 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 FAM46BQ96A09 425 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 LURAP1Q96LR2 239 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 TDRD1Q9BXT4 1180 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 NACA2Q9H009 215 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 RAB17Q9H0T7 212 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 ABCG4Q9H172 646 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 CARD9Q9H257 536 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 MTIF3Q9H2K0 278 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 KCNMB3Q9NPA1 279 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 INTS9Q9NV88 658 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 HACD3Q9P035 362 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 POLKQ9UBT6 870 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 DBF4Q9UBU7 674 aaPredicted RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 KIAA1217Q5T5P2 1943 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 CFAP65Q6ZU64 1925 aaKnown RBP3.44□□□□□ -1.86
VPS8-223ENST00000485024 KIF13BQ9NQT8 1826 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 ABCA12Q86UK0 2595 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 UBE4BO95155 1302 aa3.44□□□□□ -1.86
VPS8-223ENST00000485024 COL4A5P29400 1685 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 CTTNBP2Q8WZ74 1663 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 AKAP11Q9UKA4 1901 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 A0A087WUV0 522 aaPredicted RBP3.43□□□□□ -1.86
VPS8-223ENST00000485024 SMIM1B2RUZ4 78 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 H3BMM5 538 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 P2RY10O00398 339 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 ARPC1BO15143 372 aaKnown RBP3.43□□□□□ -1.86
VPS8-223ENST00000485024 OGTO15294 1046 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 CIDEAO60543 219 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 EPOP01588 193 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 MT-ND2P03891 347 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 PROS1P07225 676 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 TSPY4P0CV99 314 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 TSPY10P0CW01 314 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 ANOS1P23352 680 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 MARK3P27448 753 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 HPDP32754 393 aaPredicted RBP3.43□□□□□ -1.86
VPS8-223ENST00000485024 KIF5BP33176 963 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 DUTP33316 252 aaKnown RBP3.43□□□□□ -1.86
VPS8-223ENST00000485024 SLC6A12P48065 614 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 VEGFCP49767 419 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 SP3Q02447 781 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 ILF3Q12906 894 aaKnown RBP eCLIP3.43□□□□□ -1.86
VPS8-223ENST00000485024 DRP2Q13474 957 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 P2RY6Q15077 328 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 KRT31Q15323 416 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 SPHARQ15513 63 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 TAF7Q15545 349 aaPredicted RBP3.43□□□□□ -1.86
VPS8-223ENST00000485024 ZRSR1Q15695 479 aaKnown RBP3.43□□□□□ -1.86
VPS8-223ENST00000485024 ZNF74Q16587 644 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 ZNF672Q499Z4 452 aaPredicted RBP3.43□□□□□ -1.86
VPS8-223ENST00000485024 XKR3Q5GH77 459 aa3.43□□□□□ -1.86
VPS8-223ENST00000485024 DDI2Q5TDH0 399 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms