RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 HSD17B8Q92506 261 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 KCTD15Q96SI1 283 aaPredicted RBP7.47□□□□□ -1.21
COL4A5-205ENST00000483338 SAP130Q9H0E3 1048 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 ZNF226Q9NYT6 803 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 VAPAQ9P0L0 249 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 CFAP97Q9P2B7 532 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 SLC9A8Q9Y2E8 581 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 OR6C74A6NCV1 312 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 LRIT2A6NDA9 550 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 H7C0S8 307 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 ZNF197O14709 1029 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 LCMT2O60294 686 aaKnown RBP7.47□□□□□ -1.21
COL4A5-205ENST00000483338 MED6O75586 246 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 SLC34A2O95436 690 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 TMEM11P17152 192 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 NFKB1P19838 968 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 C4BPBP20851 252 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 PSMA1P25786 263 aaKnown RBP7.47□□□□□ -1.21
COL4A5-205ENST00000483338 MMP12P39900 470 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 RBP2P50120 134 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 CAV3P56539 151 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 TBX4P57082 545 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 STARD6P59095 220 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 CTBP1Q13363 440 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 MELKQ14680 651 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 SUPT20HL1Q3ZLR7 823 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 ATP6AP1LQ52LC2 224 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 GCNT6Q5T4J0 391 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 B3GNTL1Q67FW5 361 aaPredicted RBP7.47□□□□□ -1.21
COL4A5-205ENST00000483338 OR2T5Q6IEZ7 315 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 C16orf54Q6UWD8 224 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 THEM5Q8N1Q8 247 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 TMIEQ8NEW7 156 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 MDGA1Q8NFP4 955 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 OR5M9Q8NGP3 310 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 OR2T29Q8NH02 315 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 PROKR1Q8TCW9 393 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 NETO1Q8TDF5 533 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 FAM151AQ8WW52 585 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 APOL2Q9BQE5 337 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 ABHD16BQ9H3Z7 469 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 OPA3Q9H6K4 179 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 KCNK12Q9HB15 430 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 ZFP57Q9NU63 452 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 MS4A12Q9NXJ0 267 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 PCDHB10Q9UN67 800 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 PCDHB9Q9Y5E1 797 aa7.47□□□□□ -1.21
COL4A5-205ENST00000483338 A0A1B0GTL3 188 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 CXorf65A6NEN9 183 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 URADA6NGE7 173 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 ARVCFO00192 962 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 PSMD9O00233 223 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 PPEF2O14830 753 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 AZIN1O14977 448 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 KIAA0355O15063 1070 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 OIP5O43482 229 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 RAD1O60671 282 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 NUDT7P0C024 238 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 ZNF44P15621 663 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 VIPR1P32241 457 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 SDC2P34741 201 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 GGT2P36268 569 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 CDH4P55283 916 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 DHODHQ02127 395 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 POU4F2Q12837 409 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 SV2CQ496J9 727 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 PCID2Q5JVF3 399 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 OTUD1Q5VV17 481 aaPredicted RBP7.46□□□□□ -1.21
COL4A5-205ENST00000483338 RAET1GQ6H3X3 334 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 GPR149Q86SP6 731 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 OR10J5Q8NHC4 309 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 C9orf43Q8TAL5 461 aaPredicted RBP7.46□□□□□ -1.21
COL4A5-205ENST00000483338 LRR1Q96L50 414 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 SNRNP25Q9BV90 132 aaKnown RBP7.46□□□□□ -1.21
COL4A5-205ENST00000483338 MRIQ9BWK5 157 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 B3GNT5Q9BYG0 378 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 MRPL37Q9BZE1 423 aaKnown RBP7.46□□□□□ -1.21
COL4A5-205ENST00000483338 ARHGAP39Q9C0H5 1083 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 DUSP15Q9H1R2 295 aaPredicted RBP7.46□□□□□ -1.21
COL4A5-205ENST00000483338 NSUN3Q9H649 340 aaKnown RBP7.46□□□□□ -1.21
COL4A5-205ENST00000483338 MID1IP1Q9NPA3 183 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 RNF19AQ9NV58 838 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 METTL1Q9UBP6 276 aaKnown RBP7.46□□□□□ -1.21
COL4A5-205ENST00000483338 FKBPLQ9UIM3 349 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 FBXL21Q9UKT6 434 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 PPP2R3BQ9Y5P8 575 aa7.46□□□□□ -1.21
COL4A5-205ENST00000483338 ELOVL7A1L3X0 281 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 CACNB4O00305 520 aaPredicted RBP7.46□□□□□ -1.22
COL4A5-205ENST00000483338 SCELO95171 688 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 GABRA1P14867 456 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 ADCYAP1P18509 176 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 NPR2P20594 1047 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 FPR1P21462 350 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 ITGA3P26006 1051 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 HTR5AP47898 357 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 EVX1P49640 407 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 ACLYP53396 1101 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 PPP3R1P63098 170 aa7.46□□□□□ -1.22
COL4A5-205ENST00000483338 PDZK1IP1Q13113 114 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms