RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 GAL3ST4Q96RP7 486 aa12.24□□□□□ -0.45
NDC1-202ENST00000480952 EGFL8Q99944 293 aa12.24□□□□□ -0.45
NDC1-202ENST00000480952 DESI2Q9BSY9 194 aa12.24□□□□□ -0.45
NDC1-202ENST00000480952 UBTD1Q9HAC8 227 aa12.24□□□□□ -0.45
NDC1-202ENST00000480952 LYRM4Q9HD34 91 aa12.24□□□□□ -0.45
NDC1-202ENST00000480952 CNOT11Q9UKZ1 510 aaKnown RBP12.24□□□□□ -0.45
NDC1-202ENST00000480952 ZANQ9Y493 2812 aa12.24□□□□□ -0.45
NDC1-202ENST00000480952 SPACA6W5XKT8 324 aa12.24□□□□□ -0.45
NDC1-202ENST00000480952 WDR47O94967 919 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 FGGP02679 453 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 AHSGP02765 367 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 HPNP05981 417 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 CDK9P50750 372 aaKnown RBP12.23□□□□□ -0.45
NDC1-202ENST00000480952 PGGT1BP53609 377 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 FOXF2Q12947 444 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 ADPRMQ3LIE5 342 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 HMBOX1Q6NT76 420 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 SBSNQ6UWP8 590 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 OR4N5Q8IXE1 308 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 ABTB1Q969K4 478 aaPredicted RBP12.23□□□□□ -0.45
NDC1-202ENST00000480952 ANKRD9Q96BM1 317 aaPredicted RBP12.23□□□□□ -0.45
NDC1-202ENST00000480952 PPWD1Q96BP3 646 aaKnown RBP12.23□□□□□ -0.45
NDC1-202ENST00000480952 RBM18Q96H35 190 aaKnown RBP12.23□□□□□ -0.45
NDC1-202ENST00000480952 GNRHR2Q96P88 292 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 BAG1Q99933 345 aaPredicted RBP12.23□□□□□ -0.45
NDC1-202ENST00000480952 MAPKAP1Q9BPZ7 522 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 SFXN3Q9BWM7 321 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 UGT2B28Q9BY64 529 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 NT5DC2Q9H857 520 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 PRM3Q9NNZ6 103 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 PRDM7Q9NQW5 492 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.23□□□□□ -0.45
NDC1-202ENST00000480952 IKZF3Q9UKT9 509 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 NPFFR2Q9Y5X5 522 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 NBEAL1Q6ZS30 2694 aa12.23□□□□□ -0.45
NDC1-202ENST00000480952 ANK3Q12955 4377 aaKnown RBP12.22□□□□□ -0.45
NDC1-202ENST00000480952 IQANK1A0A1B0GTG1 560 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 ANKRD33BA6NCL7 494 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 HRKO00198 91 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 TP53I11O14683 189 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 SNX4O95219 450 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 KRT14P02533 472 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 IGKV3-11P04433 115 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 CCDC175P0C221 793 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 CYP4B1P13584 511 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 GDF5P43026 501 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 STT3AP46977 705 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 KCNC1P48547 511 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 MASP1P48740 699 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 HNMTP50135 292 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 DIO3P55073 304 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 NTRK2Q16620 822 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 EIPR1Q53HC9 387 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 NHSL2Q5HYW2 709 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 SLC29A4Q7RTT9 530 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 PACS2Q86VP3 889 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 AGGF1Q8N302 714 aaeCLIP12.22□□□□□ -0.45
NDC1-202ENST00000480952 ZPLD1Q8TCW7 415 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 ART5Q96L15 291 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 SIGLEC10Q96LC7 697 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 KCNC2Q96PR1 638 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 F2RL3Q96RI0 385 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 ROGDIQ9GZN7 287 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 PITHD1Q9GZP4 211 aaPredicted RBP12.22□□□□□ -0.45
NDC1-202ENST00000480952 VWA7Q9Y334 891 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 TESMINQ9Y4I5 508 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 IKBKGQ9Y6K9 419 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 ARID1AO14497 2285 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 MXRA5Q9NR99 2828 aa12.22□□□□□ -0.45
NDC1-202ENST00000480952 CAPN14A8MX76 684 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 CDC7O00311 574 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 CTIFO43310 598 aaKnown RBP12.21□□□□□ -0.45
NDC1-202ENST00000480952 RCBTB2O95199 551 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 TBX6O95947 436 aaPredicted RBP12.21□□□□□ -0.45
NDC1-202ENST00000480952 CPN2P22792 545 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 CPOXP36551 454 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 SLCO1A2P46721 670 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 PPP1R3AQ16821 1122 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 WIPI1Q5MNZ9 446 aaPredicted RBP12.21□□□□□ -0.45
NDC1-202ENST00000480952 DCST1Q5T197 706 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 C20orf204Q6ZNR8 217 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 DGAT2L6Q6ZPD8 337 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 VN1R5Q7Z5H4 357 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 PHC2Q8IXK0 858 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 TAGAPQ8N103 731 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 DOK4Q8TEW6 326 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 SLC44A1Q8WWI5 657 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 INTS12Q96CB8 462 aaKnown RBP12.21□□□□□ -0.45
NDC1-202ENST00000480952 NTNG2Q96CW9 530 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 PIK3IP1Q96FE7 263 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 PDLIM5Q96HC4 596 aaKnown RBP12.21□□□□□ -0.45
NDC1-202ENST00000480952 FBXL20Q96IG2 436 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 RILPQ96NA2 401 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 ZFP3Q96NJ6 502 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 TM9SF2Q99805 663 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 CAPS2Q9BXY5 557 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 UBQLN3Q9H347 655 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 PIGMQ9H3S5 423 aa12.21□□□□□ -0.45
NDC1-202ENST00000480952 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.45
NDC1-202ENST00000480952 ZNF226Q9NYT6 803 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms