RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PNO1Q9NRX1 252 aaKnown RBP18.45■□□□□ 0.54
LIME1-205ENST00000480139 MARCOQ9UEW3 520 aaPredicted RBP18.45■□□□□ 0.54
LIME1-205ENST00000480139 GIMAP2Q9UG22 337 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 DOCK10Q96BY6 2186 aa18.45■□□□□ 0.54
LIME1-205ENST00000480139 WASHC1A8K0Z3 465 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 MASP2O00187 686 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 PRPS2P11908 318 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 TACR1P25103 407 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 ASMTP46597 345 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 ALDH9A1P49189 494 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 ERVK-8P63133 956 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 C2orf80Q0P641 193 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 SPRED3Q2MJR0 410 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 IRAK1BP1Q5VVH5 260 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 FNDC5Q8NAU1 212 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 MORN4Q8NDC4 146 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 FDCSPQ8NFU4 85 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 KLHL29Q96CT2 875 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 RBM18Q96H35 190 aaKnown RBP18.44■□□□□ 0.54
LIME1-205ENST00000480139 THOC3Q96J01 351 aaKnown RBP18.44■□□□□ 0.54
LIME1-205ENST00000480139 MAELQ96JY0 434 aaKnown RBP18.44■□□□□ 0.54
LIME1-205ENST00000480139 SLCO1B3Q9NPD5 702 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 GPR83Q9NYM4 423 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 TAS2R7Q9NYW3 318 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 PCDHGB7Q9Y5F8 929 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 CLCA3PQ9Y6N3 262 aa18.44■□□□□ 0.54
LIME1-205ENST00000480139 IGSF10Q6WRI0 2623 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 ATMQ13315 3056 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 SDHDO14521 159 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 TBX19O60806 448 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 FAM87AP0C7U9 286 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 KITP10721 976 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 CPMP14384 443 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 PORP16435 677 aaPredicted RBP18.43■□□□□ 0.54
LIME1-205ENST00000480139 GPR143P51810 404 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 XKP51811 444 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 CEBPEQ15744 281 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 OGFOD2Q6N063 350 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 LARP4Q71RC2 724 aaKnown RBP eCLIP18.43■□□□□ 0.549e-8■■□□□ 14.1
LIME1-205ENST00000480139 ELP5Q8TE02 316 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 MTERF3Q96E29 417 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 EGLN2Q96KS0 407 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 PPP1R36Q96LQ0 422 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 SMAD5Q99717 465 aaKnown RBP18.43■□□□□ 0.54
LIME1-205ENST00000480139 SLC25A23Q9BV35 468 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 MIEF1Q9NQG6 463 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 NOP53Q9NZM5 478 aaKnown RBP18.43■□□□□ 0.54
LIME1-205ENST00000480139 UTS2RQ9UKP6 389 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 EXO1Q9UQ84 846 aaKnown RBP18.43■□□□□ 0.54
LIME1-205ENST00000480139 EIF3LQ9Y262 564 aaKnown RBP18.43■□□□□ 0.54
LIME1-205ENST00000480139 ZNF780BQ9Y6R6 833 aa18.43■□□□□ 0.54
LIME1-205ENST00000480139 A6NL46 340 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 A8MUA0 341 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 C17orf105B2RV13 164 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 ZNF195O14628 629 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 ATXN7O15265 892 aaPredicted RBP18.42■□□□□ 0.54
LIME1-205ENST00000480139 DYRK3O43781 588 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 OR10H2O60403 315 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 TGDSO95455 350 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 ATP1B1P05026 303 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 PCSK2P16519 638 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 LBPP18428 481 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 CSNK2A2P19784 350 aaPredicted RBP18.42■□□□□ 0.54
LIME1-205ENST00000480139 VWA5B1Q5TIE3 1220 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 IL23RQ5VWK5 629 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 TCTN3Q6NUS6 607 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 H3F3CQ6NXT2 135 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 LIX1Q8N485 282 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 EXD3Q8N9H8 876 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 APCDD1LQ8NCL9 501 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 CDC26Q8NHZ8 85 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 PSMF1Q92530 271 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 CNRIP1Q96F85 164 aaPredicted RBP18.42■□□□□ 0.54
LIME1-205ENST00000480139 VMP1Q96GC9 406 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 ABHD17AQ96GS6 310 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 ART5Q96L15 291 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 ZNF681Q96N22 645 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 TSSK3Q96PN8 268 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 NUDT9Q9BW91 350 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 SEMA4CQ9C0C4 833 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 ZNF552Q9H707 407 aaPredicted RBP18.42■□□□□ 0.54
LIME1-205ENST00000480139 SLC35C2Q9NQQ7 365 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 C5AR2Q9P296 337 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 USH1CQ9Y6N9 552 aa18.42■□□□□ 0.54
LIME1-205ENST00000480139 CPAMD8Q8IZJ3 1885 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 MYOCOSA0A1B0GUC4 107 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 ERAL1O75616 437 aaKnown RBP18.41■□□□□ 0.54
LIME1-205ENST00000480139 DDAH2O95865 285 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 ALPPP05187 535 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 CELA2AP08217 269 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 ITGAMP11215 1152 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 TNNI3P19429 210 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 SOX11P35716 441 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 RPL3P39023 403 aaKnown RBP18.41■□□□□ 0.54
LIME1-205ENST00000480139 PDE7AQ13946 482 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 CRB2Q5IJ48 1285 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 AGAP7PQ5VUJ5 663 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 MAVSQ7Z434 540 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 HPS6Q86YV9 775 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 TICAM1Q8IUC6 712 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms