RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 CDH7Q9ULB5 785 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 RHPN2P1A8MT19 583 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 AXIN1O15169 862 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 UBXN7O94888 489 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 MADCAM1Q13477 382 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 DSG2Q14126 1118 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 UGT8Q16880 541 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 PNCKQ6P2M8 343 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 Q6ZNB5 142 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDAC6-220ENST00000477528 GRHL3Q8TE85 626 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 SLC6A16Q9GZN6 736 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 AKAP7Q9P0M2 348 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-220ENST00000477528 MED31Q9Y3C7 131 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 TRBV5-4A0A0C4DH59 114 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 BTN3A3O00478 584 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 PIM1P11309 404 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-220ENST00000477528 TCF3P15923 654 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 ZNF3P17036 446 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 ACVR2AP27037 513 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 NTSR1P30989 418 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 BMP8BP34820 402 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 PFN3P60673 137 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 CDK3Q00526 305 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 APOFQ13790 326 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 FAM180BQ6P0A1 224 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 C11orf88Q6PI97 169 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 SLCO4C1Q6ZQN7 724 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 BMP8AQ7Z5Y6 402 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 MARCH9Q86YJ5 346 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 OR9Q2Q8NGE9 314 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 PHOSPHO2Q8TCD6 241 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 RC3H2Q9HBD1 1191 aaKnown RBP13.94□□□□□ -0.18
HDAC6-220ENST00000477528 ZC4H2Q9NQZ6 224 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 C5AR2Q9P296 337 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 GPR89AB7ZAQ6 455 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-220ENST00000477528 GPR89BP0CG08 455 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 DCKP27707 260 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 SLC6A11P48066 632 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 NCS1P62166 190 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 PRPF38BQ5VTL8 546 aaKnown RBP13.94□□□□□ -0.18
HDAC6-220ENST00000477528 HSDL2Q6YN16 418 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 METTL25Q8N6Q8 603 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 AVL9Q8NBF6 648 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 FBXO15Q8NCQ5 510 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-220ENST00000477528 TBX5Q99593 518 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 ASPNQ9BXN1 380 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 CLEC4MQ9H2X3 399 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-220ENST00000477528 EPHX3Q9H6B9 360 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 KCNK12Q9HB15 430 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 IKZF2Q9UKS7 526 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 PCDHGB7Q9Y5F8 929 aa13.94□□□□□ -0.18
HDAC6-220ENST00000477528 B4DGG1 531 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 OSMP13725 252 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 GGT2P36268 569 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 ALDH3B2P48448 385 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 HBA1P69905 142 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 ADNP2Q6IQ32 1131 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 LRRC25Q8N386 305 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 METTL4Q8N3J2 472 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 KCT2Q8NC54 265 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 C11orf24Q96F05 449 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 ZNF419Q96HQ0 510 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 RSPH9Q9H1X1 276 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 NMNAT1Q9HAN9 279 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 TMEM5Q9Y2B1 443 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 A0A0G2JPF8 293 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 HNRNPCL3B7ZW38 293 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 HNRNPCL4P0DMR1 293 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 CNR2P34972 360 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 HTRA3P83110 453 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 ELOAQ14241 798 aaKnown RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 KLHDC8BQ8IXV7 354 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 OR56A3Q8NH54 315 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 SORBS1Q9BX66 1292 aaKnown RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 HCFC2Q9Y5Z7 792 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 A0A1B0GTL3 188 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 C2orf74A8MZ97 194 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 XKRYO14609 159 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 SLC15A4Q8N697 577 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 SLC22A4Q9H015 551 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 ACTL8Q9H568 366 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 PAK6Q9NQU5 681 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 NEU3Q9UQ49 428 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 MCIDASD6RGH6 385 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 AGRPO00253 132 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 ATE1O95260 518 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 CKMT1AP12532 417 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 MLLT1Q03111 559 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 DNASE1L3Q13609 305 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 SPHARQ15513 63 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 DEFB134Q4QY38 66 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 RPS26P11Q5JNZ5 115 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 LRIF1Q5T3J3 769 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 SLC9B2Q86UD5 537 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 JPH3Q8WXH2 748 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-220ENST00000477528 DGAT2Q96PD7 388 aa13.93□□□□□ -0.18
HDAC6-220ENST00000477528 FBRSQ9HAH7 460 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms