RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	LARS2	Q15031	903 aa	Known RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	NCF4	Q15080	339 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	TCTE1	Q5JU00	501 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	MEDAG	Q5VYS4	303 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SAXO2	Q658L1	398 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	DENND1B	Q6P3S1	775 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM270	Q6UE05	265 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	B3GNT9	Q6UX72	402 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM131A	Q6UXB0	335 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	C3P1	Q6ZMU1	363 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	TRIL	Q7L0X0	811 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ARMCX2	Q7L311	632 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CTU1	Q7Z7A3	348 aa	Known RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZER1	Q7Z7L7	766 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	RBM23	Q86U06	439 aa	Known RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CUZD1	Q86UP6	607 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZDHHC17	Q8IUH5	632 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CNTN4	Q8IWV2	1026 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SPAG16	Q8N0X2	631 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CYP4Z2P	Q8N1L4	340 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF557	Q8N988	423 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	C19orf47	Q8N9M1	422 aa	Known RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	BVES	Q8NE79	360 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	OR2T4	Q8NH00	348 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SVIP	Q8NHG7	77 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CYP2W1	Q8TAV3	490 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	HMGCLL1	Q8TB92	370 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SCARB1	Q8WTV0	552 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ARNTL2	Q8WYA1	636 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACOT12	Q8WYK0	555 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	UCN3	Q969E3	161 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ISG20	Q96AZ6	181 aa	Known RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	NEIL1	Q96FI4	390 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PGAP3	Q96FM1	320 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	OTUB1	Q96FW1	271 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SCMH1	Q96GD3	660 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM68	Q96MH6	324 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	AGAP2	Q99490	1192 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SEPHS2	Q99611	448 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	KCNJ15	Q99712	375 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PDCD2L	Q9BRP1	358 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM175	Q9BSA9	504 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	TINF2	Q9BSI4	451 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	INPP5K	Q9BT40	448 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	MRPL4	Q9BYD3	311 aa	Known RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ALOXE3	Q9BYJ1	711 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	REG4	Q9BYZ8	158 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	CD244	Q9BZW8	370 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	BRINP2	Q9C0B6	783 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZYG11B	Q9C0D3	744 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SIK2	Q9H0K1	926 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	LMAN2L	Q9H0V9	348 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ALX4	Q9H161	411 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	KCNH6	Q9H252	994 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	NKX2-4	Q9H2Z4	354 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	GHITM	Q9H3K2	345 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACTR8	Q9H981	624 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC28A3	Q9HAS3	691 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ISYNA1	Q9NPH2	558 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	ABCB8	Q9NUT2	735 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	KLHL11	Q9NVR0	708 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SPHK1	Q9NYA1	384 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	NDUFAF4	Q9P032	175 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SH3BP4	Q9P0V3	963 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	AASS	Q9UDR5	926 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	RPS6KA6	Q9UK32	745 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC39A10	Q9ULF5	831 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	EDAR	Q9UNE0	448 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SSR3	Q9UNL2	185 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	SAMD4A	Q9UPU9	718 aa	Known RBP	4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	PTCH2	Q9Y6C5	1203 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	STYXL1	Q9Y6J8	313 aa		4.49	□□□□□ -1.69
PTCD3-212	ENST00000477520	IRGM	A1A4Y4	181 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC22A23	A1A5C7	686 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	TRABD2B	A6NFA1	517 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520		A8MV72	311 aa	Predicted RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520		D6RAR5	112 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	DNASE2	O00115	360 aa	Predicted RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	QSOX1	O00391	747 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	AP3D1	O14617	1153 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	FABP7	O15540	132 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SGCE	O43556	437 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	XPNPEP2	O43895	674 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	PRKY	O43930	277 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SELENOF	O60613	162 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MSC	O60682	206 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC19A2	O60779	497 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC22A3	O75751	556 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	AQP8	O94778	261 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	PIGR	P01833	764 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MT-ND1	P03886	318 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	SCG5	P05408	212 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	HEXA	P06865	529 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	ADRB2	P07550	413 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	HBQ1	P09105	142 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	FBP1	P09467	338 aa		4.48	□□□□□ -1.69

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