RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NUBPLQ8TB37 319 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 DOK4Q8TEW6 326 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 PAQR8Q8TEZ7 354 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 ANKRD9Q96BM1 317 aaPredicted RBP12.88□□□□□ -0.35
CCDC78-209ENST00000474647 PPWD1Q96BP3 646 aaKnown RBP12.88□□□□□ -0.35
CCDC78-209ENST00000474647 SH3GL2Q99962 352 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 EFCAB11Q9BUY7 163 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 MS4A8Q9BY19 250 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 EHD1Q9H4M9 534 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 ZFP64Q9NPA5 681 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 CD274Q9NZQ7 290 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 TEX264Q9Y6I9 313 aa12.88□□□□□ -0.35
CCDC78-209ENST00000474647 LRRC3CA6NJW4 275 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 KDM4EB2RXH2 506 aaPredicted RBP12.87□□□□□ -0.35
CCDC78-209ENST00000474647 STK16O75716 305 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 RAF1P04049 648 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 STT3AP46977 705 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 PLIN5Q00G26 463 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 IRF8Q02556 426 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 CHIT1Q13231 466 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 LAPTM5Q13571 262 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 KEAP1Q14145 624 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 MORF4L2Q15014 288 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 AP5B1Q2VPB7 878 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 DGAT2L6Q6ZPD8 337 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 CAPN12Q6ZSI9 719 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 SEM1Q6ZVN7 128 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 Q71RC1 249 aaPredicted RBP12.87□□□□□ -0.35
CCDC78-209ENST00000474647 SLC29A4Q7RTT9 530 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 CAMKMTQ7Z624 323 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 UBE3DQ7Z6J8 389 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 GPSM1Q86YR5 675 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 LRRC25Q8N386 305 aaPredicted RBP12.87□□□□□ -0.35
CCDC78-209ENST00000474647 SPATA4Q8NEY3 305 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 FAM222BQ8WU58 562 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 RNASE6Q93091 150 aaKnown RBP12.87□□□□□ -0.35
CCDC78-209ENST00000474647 SENP5Q96HI0 755 aaPredicted RBP12.87□□□□□ -0.35
CCDC78-209ENST00000474647 ART5Q96L15 291 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 ZNF597Q96LX8 424 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 TBCDQ9BTW9 1192 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 DOHHQ9BU89 302 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 SORBS1Q9BX66 1292 aaKnown RBP12.87□□□□□ -0.35
CCDC78-209ENST00000474647 PHACTR1Q9C0D0 580 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 DERL2Q9GZP9 239 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 L2HGDHQ9H9P8 463 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 CAB39LQ9H9S4 337 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 SH2D2AQ9NP31 389 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 DLL4Q9NR61 685 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 MTRF1LQ9UGC7 380 aaKnown RBP12.87□□□□□ -0.35
CCDC78-209ENST00000474647 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
CCDC78-209ENST00000474647 TUBAL3A6NHL2 446 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 SYT5O00445 386 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 PRKRAO75569 313 aaKnown RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 TRAPPC6AO75865 159 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 PIAS1O75925 651 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 TGFB1P01137 390 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 IL2RAP01589 272 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 S100BP04271 92 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 HIST1H1TP22492 207 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 ARL4CP56559 192 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 HERVK_113P63132 956 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 ERVK-8P63133 956 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 TBL3Q12788 808 aaKnown RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 DUSP8Q13202 625 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 DDX39BQ13838 428 aaKnown RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 FASTKD3Q14CZ7 662 aaKnown RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 OR4D1Q15615 310 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 ACSF3Q4G176 576 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 SULT1C3Q6IMI6 304 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 LYPD8Q6UX82 237 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 BBOF1Q8ND07 529 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 FBXO36Q8NEA4 188 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 WFDC11Q8NEX6 87 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 LRRC39Q96DD0 335 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 RBM18Q96H35 190 aaKnown RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 ERVK-6Q9BXR3 956 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 RHOJQ9H4E5 214 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 POPDC3Q9HBV1 291 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 CNIH4Q9P003 139 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 CAMK2AQ9UQM7 478 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 ERVK-19Q9WJR5 959 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 RPH3AQ9Y2J0 694 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 PCDHGB3Q9Y5G1 929 aa12.86□□□□□ -0.35
CCDC78-209ENST00000474647 CHCHD2Q9Y6H1 151 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-209ENST00000474647 IQANK1A0A1B0GTG1 560 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 EEF1E1-BLOC1S5C9J1V9 151 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 PHGDHO43175 533 aaKnown RBP12.85□□□□□ -0.35
CCDC78-209ENST00000474647 EEF1E1O43324 174 aaKnown RBP12.85□□□□□ -0.35
CCDC78-209ENST00000474647 IGKV3-11P04433 115 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 FBXO45P0C2W1 286 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 CCDC166P0CW27 439 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 FOSL1P15407 271 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 IVDP26440 423 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 SERPINB3P29508 390 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 GGT5P36269 586 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 RAP1GDS1P52306 607 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 IGLV3-21P80748 117 aaPredicted RBP12.85□□□□□ -0.35
CCDC78-209ENST00000474647 LTBQ06643 244 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 C2orf54Q08AI8 447 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms