RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 GIMAP4Q9NUV9 329 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.84□□□□□ -0.35
USF1-205ENST00000473969 PLA2G3Q9NZ20 509 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 PCDHA9Q9Y5H5 950 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 ZNF780BQ9Y6R6 833 aa12.84□□□□□ -0.35
USF1-205ENST00000473969 DHRS4L1P0CG22 281 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 SLC35E2P0CK97 266 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 H2AFXP16104 143 aaPredicted RBP12.83□□□□□ -0.36
USF1-205ENST00000473969 PORP16435 677 aaPredicted RBP12.83□□□□□ -0.36
USF1-205ENST00000473969 XKP51811 444 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 SLC6A19Q695T7 634 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 GALNT18Q6P9A2 607 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 HSDL2Q6YN16 418 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 CRLF3Q8IUI8 442 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 SAMD14Q8IZD0 417 aaPredicted RBP12.83□□□□□ -0.36
USF1-205ENST00000473969 LGI4Q8N135 537 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 KIF2BQ8N4N8 673 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 HORMAD2Q8N7B1 307 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 OR5L2Q8NGL0 311 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 SLC2A12Q8TD20 617 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 PTPMT1Q8WUK0 201 aaPredicted RBP12.83□□□□□ -0.36
USF1-205ENST00000473969 HAS2Q92819 552 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 RIT1Q92963 219 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 PPWD1Q96BP3 646 aaKnown RBP12.83□□□□□ -0.36
USF1-205ENST00000473969 TLCD1Q96CP7 247 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 KLHL29Q96CT2 875 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 UTP23Q9BRU9 249 aaKnown RBP12.83□□□□□ -0.36
USF1-205ENST00000473969 C1orf109Q9NX04 203 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 SIRT5Q9NXA8 310 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 MAP10Q9P2G4 905 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 DLGAP4Q9Y2H0 992 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 WBP11Q9Y2W2 641 aaKnown RBP12.83□□□□□ -0.36
USF1-205ENST00000473969 CLDN16Q9Y5I7 305 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 DNAJC15Q9Y5T4 150 aa12.83□□□□□ -0.36
USF1-205ENST00000473969 TRAV17A0A0B4J275 112 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 WASHC1A8K0Z3 465 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 CDK2AP1O14519 115 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 WDPCPO95876 746 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 IL3P08700 152 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 NT5EP21589 574 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 BGNP21810 368 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 GALNSP34059 522 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 SLC1A6P48664 564 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 SLC18A1P54219 525 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 OC90Q02509 493 aaPredicted RBP12.82□□□□□ -0.36
USF1-205ENST00000473969 ZNF763Q0D2J5 394 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 C2orf80Q0P641 193 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 MPP2Q14168 576 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 ZNF267Q14586 743 aaPredicted RBP12.82□□□□□ -0.36
USF1-205ENST00000473969 ZNF169Q14929 603 aaPredicted RBP12.82□□□□□ -0.36
USF1-205ENST00000473969 GALNTL6Q49A17 601 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 COLEC12Q5KU26 742 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 ATG16L1Q676U5 607 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 NOXRED1Q6NXP6 359 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 SLC48A1Q6P1K1 146 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 Q6ZS92 163 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 RNF165Q6ZSG1 346 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 BEST3Q8N1M1 668 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 APCDD1LQ8NCL9 501 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 OR1N1Q8NGS0 311 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 C16orf78Q8WTQ4 265 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 THAP3Q8WTV1 239 aaPredicted RBP12.82□□□□□ -0.36
USF1-205ENST00000473969 SENP5Q96HI0 755 aaPredicted RBP12.82□□□□□ -0.36
USF1-205ENST00000473969 ATP6V1G3Q96LB4 118 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 CNPPD1Q9BV87 410 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 RNF32Q9H0A6 362 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 MIEF1Q9NQG6 463 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 ZDHHC2Q9UIJ5 367 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 UTS2RQ9UKP6 389 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 PPIEQ9UNP9 301 aaKnown RBP12.82□□□□□ -0.36
USF1-205ENST00000473969 ENTPD4Q9Y227 616 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.82□□□□□ -0.36
USF1-205ENST00000473969 TMED5Q9Y3A6 229 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 RAP2CQ9Y3L5 183 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 POLR3HQ9Y535 204 aaPredicted RBP12.82□□□□□ -0.36
USF1-205ENST00000473969 SCN2AQ99250 2005 aa12.82□□□□□ -0.36
USF1-205ENST00000473969 OR5H15A6NDH6 313 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 GABRR3A8MPY1 467 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 TMEM233B4DJY2 109 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 PIP5K1BO14986 540 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 SKAP2O75563 359 aaPredicted RBP12.81□□□□□ -0.36
USF1-205ENST00000473969 LYPLA1O75608 230 aaPredicted RBP12.81□□□□□ -0.36
USF1-205ENST00000473969 F10P00742 488 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 CPMP14384 443 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 CSNK2A2P19784 350 aaPredicted RBP12.81□□□□□ -0.36
USF1-205ENST00000473969 PRPH2P23942 346 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 MAPK1P28482 360 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 FEN1P39748 380 aaKnown RBP12.81□□□□□ -0.36
USF1-205ENST00000473969 CD97P48960 835 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 RPL14P50914 215 aaKnown RBP12.81□□□□□ -0.36
USF1-205ENST00000473969 MLF1P58340 268 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 RAE1P78406 368 aaKnown RBP12.81□□□□□ -0.36
USF1-205ENST00000473969 PLEKHN1Q494U1 663 aaPredicted RBP12.81□□□□□ -0.36
USF1-205ENST00000473969 ATP6AP1LQ52LC2 224 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 GALNT12Q8IXK2 581 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 TMEM156Q8N614 296 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 AMER2Q8N7J2 671 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 CATSPER1Q8NEC5 780 aa12.81□□□□□ -0.36
USF1-205ENST00000473969 OR6Y1Q8NGX8 325 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms