RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 EXOC3L1Q86VI1 746 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 ST13P4Q8IZP2 240 aaPredicted RBP17.61■□□□□ 0.41
PTCD3-210ENST00000473829 GALNT11Q8NCW6 608 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 C11orf24Q96F05 449 aaPredicted RBP17.61■□□□□ 0.41
PTCD3-210ENST00000473829 UTP23Q9BRU9 249 aaKnown RBP17.61■□□□□ 0.41
PTCD3-210ENST00000473829 CLMPQ9H6B4 373 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 NMRK1Q9NWW6 199 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 SENP1Q9P0U3 644 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 CES1P1Q9UKY3 287 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 PCDHA9Q9Y5H5 950 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 PTGDR2Q9Y5Y4 395 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 FLNCQ14315 2725 aa17.61■□□□□ 0.41
PTCD3-210ENST00000473829 CCDC151A5D8V7 595 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 H3BQF6 201 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 PCDH7O60245 1069 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 NEURL1O76050 574 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 IGKV3-11P04433 115 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 COX7A2P14406 83 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 ARRB2P32121 409 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 OC90Q02509 493 aaPredicted RBP17.6■□□□□ 0.41
PTCD3-210ENST00000473829 SRSF11Q05519 484 aaKnown RBP17.6■□□□□ 0.41
PTCD3-210ENST00000473829 BTKQ06187 659 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 MRPL49Q13405 166 aaKnown RBP17.6■□□□□ 0.41
PTCD3-210ENST00000473829 ZNF766Q5HY98 468 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 HSDL2Q6YN16 418 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 ATCAYQ86WG3 371 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 MCM8Q9UJA3 840 aa17.6■□□□□ 0.41
PTCD3-210ENST00000473829 VPS4BO75351 444 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 CRCPO75575 148 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 ITGA10O75578 1167 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 ZFAND5O76080 213 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 UROSP10746 265 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 TRHRP34981 398 aaPredicted RBP17.59■□□□□ 0.41
PTCD3-210ENST00000473829 PMP22Q01453 160 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 ACSM2AQ08AH3 577 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 NR6A1Q15406 480 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 SPRED3Q2MJR0 410 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 SPIN4Q56A73 249 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 BEND6Q5SZJ8 279 aaPredicted RBP17.59■□□□□ 0.41
PTCD3-210ENST00000473829 ACSM2BQ68CK6 577 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 SLC48A1Q6P1K1 146 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 TRIM46Q7Z4K8 759 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 SCMH1Q96GD3 660 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 RBM18Q96H35 190 aaKnown RBP17.59■□□□□ 0.41
PTCD3-210ENST00000473829 SENP5Q96HI0 755 aaPredicted RBP17.59■□□□□ 0.41
PTCD3-210ENST00000473829 TRMOQ9BU70 441 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 EBPLQ9BY08 206 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 CENPHQ9H3R5 247 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 TRIM45Q9H8W5 580 aaPredicted RBP17.59■□□□□ 0.41
PTCD3-210ENST00000473829 KLHL1Q9NR64 748 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 LRFN1Q9P244 771 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 HEY2Q9UBP5 337 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 VPS4AQ9UN37 437 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 FIS1Q9Y3D6 152 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 CCL27Q9Y4X3 112 aa17.59■□□□□ 0.41
PTCD3-210ENST00000473829 C1orf226A1L170 272 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 TMEM233B4DJY2 109 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 FCHO1O14526 889 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 AZIN1O14977 448 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 OR10H2O60403 315 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 NPHS1O60500 1241 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 OR2J2O76002 312 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 CLPSP04118 112 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 BPGMP07738 259 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 IL3P08700 152 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 SLC35E2P0CK97 266 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 PIK3R1P27986 724 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 TIA1P31483 386 aaKnown RBP eCLIP17.58■□□□□ 0.4
PTCD3-210ENST00000473829 HK2P52789 917 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 ERVK-8P63133 956 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 RNF4P78317 190 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 DUSP2Q05923 314 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 ASPHQ12797 758 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 BIKQ13323 160 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 INAQ16352 499 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 ARL13AQ5H913 290 aaPredicted RBP17.58■□□□□ 0.4
PTCD3-210ENST00000473829 SPDYAQ5MJ70 313 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 CES4AQ5XG92 561 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 KANK2Q63ZY3 851 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 FAM180BQ6P0A1 224 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 GALNT18Q6P9A2 607 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 LRIG3Q6UXM1 1119 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 C9orf40Q8IXQ3 194 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 C7orf57Q8NEG2 295 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 OR4K14Q8NGD5 310 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 SUN3Q8TAQ9 357 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 FBXL20Q96IG2 436 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 PKNOX2Q96KN3 472 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 PELOQ9BRX2 385 aaKnown RBP17.58■□□□□ 0.4
PTCD3-210ENST00000473829 CNPPD1Q9BV87 410 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 TUBB1Q9H4B7 451 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 MYOTQ9UBF9 498 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 COPS7AQ9UBW8 275 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 ERVK-19Q9WJR5 959 aa17.58■□□□□ 0.4
PTCD3-210ENST00000473829 WWP2O00308 870 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 ZNF354AO60765 605 aaPredicted RBP17.57■□□□□ 0.4
PTCD3-210ENST00000473829 GUCY1B2O75343 617 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 CT62P0C5K7 136 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 PTGER1P34995 402 aa17.57■□□□□ 0.4
PTCD3-210ENST00000473829 HLCSP50747 726 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms