RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PODNL1Q6PEZ8 512 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 C20orf204Q6ZNR8 217 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 C7orf57Q8NEG2 295 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 ZPLD1Q8TCW7 415 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 TMEM158Q8WZ71 300 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 ZFP3Q96NJ6 502 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 COPS7BQ9H9Q2 264 aaPredicted RBP17.37■□□□□ 0.37
SORT1-203ENST00000471996 LYRM4Q9HD34 91 aa17.37■□□□□ 0.37
SORT1-203ENST00000471996 RYDENQ9NUL5 291 aaKnown RBP17.37■□□□□ 0.37
SORT1-203ENST00000471996 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.36■□□□□ 0.37
SORT1-203ENST00000471996 COX7A2P14406 83 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 GABRB3P28472 473 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 MSH2P43246 934 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 SLCO1A2P46721 670 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 RPL21P46778 160 aaKnown RBP17.36■□□□□ 0.37
SORT1-203ENST00000471996 PTH2RP49190 550 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 SLBPQ14493 270 aaKnown RBP eCLIP17.36■□□□□ 0.37
SORT1-203ENST00000471996 TRIP13Q15645 432 aaPredicted RBP17.36■□□□□ 0.37
SORT1-203ENST00000471996 NTRK2Q16620 822 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 SBSNQ6UWP8 590 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 SLCO4C1Q6ZQN7 724 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 DIO2Q92813 273 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 ABTB1Q969K4 478 aaPredicted RBP17.36■□□□□ 0.37
SORT1-203ENST00000471996 ANKRD9Q96BM1 317 aaPredicted RBP17.36■□□□□ 0.37
SORT1-203ENST00000471996 PIGMQ9H3S5 423 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 PRDM7Q9NQW5 492 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 IKZF3Q9UKT9 509 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 ZKSCAN5Q9Y2L8 839 aa17.36■□□□□ 0.37
SORT1-203ENST00000471996 A8MXE2 369 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 RCBTB2O95199 551 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 IFNA2P01563 188 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 GNAZP19086 355 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 MC3RP41968 323 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 STT3AP46977 705 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 PDAP1Q13442 181 aaKnown RBP17.35■□□□□ 0.37
SORT1-203ENST00000471996 HEPHL1Q6MZM0 1159 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 VN1R5Q7Z5H4 357 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 RNF214Q8ND24 703 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 SLC44A1Q8WWI5 657 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 PIK3IP1Q96FE7 263 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 GNRHR2Q96P88 292 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 NT5DC2Q9H857 520 aa17.35■□□□□ 0.37
SORT1-203ENST00000471996 XAB2Q9HCS7 855 aaKnown RBP17.35■□□□□ 0.37
SORT1-203ENST00000471996 CHD3Q12873 2000 aaKnown RBP17.35■□□□□ 0.37
SORT1-203ENST00000471996 ANKDD1BA6NHY2 528 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 HRKO00198 91 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 DYRK3O43781 588 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 SNX4O95219 450 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 CYP4B1P13584 511 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 SOX18P35713 384 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 VPS41P49754 854 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 PGGT1BP53609 377 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 DIO3P55073 304 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 GPS1Q13098 491 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 PPP1R3AQ16821 1122 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 EIPR1Q53HC9 387 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 FNDC7Q5VTL7 733 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 KRT78Q8N1N4 520 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 AGGF1Q8N302 714 aaeCLIP17.34■□□□□ 0.372e-10■■□□□ 12.3
SORT1-203ENST00000471996 ZNF441Q8N8Z8 693 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 MCUQ8NE86 351 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 INTS12Q96CB8 462 aaKnown RBP17.34■□□□□ 0.37
SORT1-203ENST00000471996 FBXL20Q96IG2 436 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 ART5Q96L15 291 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 WFIKKN1Q96NZ8 548 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 SERPINB12Q96P63 405 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 DGAT2Q96PD7 388 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 TM9SF2Q99805 663 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 MAPKAP1Q9BPZ7 522 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 PITHD1Q9GZP4 211 aaPredicted RBP17.34■□□□□ 0.37
SORT1-203ENST00000471996 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.34■□□□□ 0.37
SORT1-203ENST00000471996 ZNF226Q9NYT6 803 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 C15orf41Q9Y2V0 281 aa17.34■□□□□ 0.37
SORT1-203ENST00000471996 GOLGA8MH3BSY2 632 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 TP53I11O14683 189 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 FGF17O60258 216 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 AHSGP02765 367 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 NID1P14543 1247 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 PAX1P15863 534 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 KCNC1P48547 511 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 IGLV3-21P80748 117 aaPredicted RBP17.33■□□□□ 0.36
SORT1-203ENST00000471996 TGM3Q08188 693 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 DMTNQ08495 405 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 WIPI1Q5MNZ9 446 aaPredicted RBP17.33■□□□□ 0.36
SORT1-203ENST00000471996 BICRALQ6AI39 1079 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 DGAT2L6Q6ZPD8 337 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 SLC29A4Q7RTT9 530 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 PACS2Q86VP3 889 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 OR4N5Q8IXE1 308 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 TXLNBQ8N3L3 684 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 PPWD1Q96BP3 646 aaKnown RBP17.33■□□□□ 0.36
SORT1-203ENST00000471996 RBM18Q96H35 190 aaKnown RBP17.33■□□□□ 0.36
SORT1-203ENST00000471996 PDLIM5Q96HC4 596 aaKnown RBP17.33■□□□□ 0.36
SORT1-203ENST00000471996 RILPQ96NA2 401 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 KCNC2Q96PR1 638 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 GAL3ST4Q96RP7 486 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 TUBA1CQ9BQE3 449 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 TRIM5Q9C035 493 aa17.33■□□□□ 0.36
SORT1-203ENST00000471996 ACTL6AO96019 429 aa17.32■□□□□ 0.36
SORT1-203ENST00000471996 F12P00748 615 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms