RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 AHRRA9YTQ3 701 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 STK16O75716 305 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 LRATO95237 230 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 FBXO45P0C2W1 286 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 CPN2P22792 545 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 TIMP3P35625 211 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 MSH2P43246 934 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 ZNF136P52737 540 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 LTBQ06643 244 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 CRYZQ08257 329 aaKnown RBP12.01□□□□□ -0.49
PTPN7-207ENST00000468385 MGAT5Q09328 741 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 DUSP8Q13202 625 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 E2F2Q14209 437 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 MORF4L2Q15014 288 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 PDK4Q16654 411 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 BIVMQ86UB2 503 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 ANKMY2Q8IV38 441 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 DND1Q8IYX4 353 aaKnown RBP12.01□□□□□ -0.49
PTPN7-207ENST00000468385 BBOF1Q8ND07 529 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 C7orf57Q8NEG2 295 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 DOK4Q8TEW6 326 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 LRRC39Q96DD0 335 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 LRRC46Q96FV0 321 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 FBXL20Q96IG2 436 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 JSRP1Q96MG2 331 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-207ENST00000468385 SMR3AQ99954 134 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 RHOJQ9H4E5 214 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 PLEKHF2Q9H8W4 249 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 CNOT10Q9H9A5 744 aaKnown RBP12.01□□□□□ -0.49
PTPN7-207ENST00000468385 MOCS1Q9NZB8 636 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 CNIH4Q9P003 139 aa12.01□□□□□ -0.49
PTPN7-207ENST00000468385 MTRF1LQ9UGC7 380 aaKnown RBP12.01□□□□□ -0.49
PTPN7-207ENST00000468385 C15orf38-AP3S2A0A0A6YYH1 394 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 A0A1B0GTL3 188 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 GPR37O15354 613 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 SH3BGRLO75368 114 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 TRIM3O75382 744 aaPredicted RBP12□□□□□ -0.49
PTPN7-207ENST00000468385 TGFB1P01137 390 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 C1QAP02745 245 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 EPXP11678 715 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 HOXC12P31275 282 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 CHIT1Q13231 466 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 LAPTM5Q13571 262 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 KEAP1Q14145 624 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 OR4D1Q15615 310 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 TBCCQ15814 346 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 NTRK2Q16620 822 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 HIST2H2ACQ16777 129 aaPredicted RBP12□□□□□ -0.49
PTPN7-207ENST00000468385 AP5B1Q2VPB7 878 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 TMEM35AQ53FP2 167 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 PAGE2BQ5JRK9 111 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 CDKL4Q5MAI5 379 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 HIST2H2AA3Q6FI13 130 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 SULT1C3Q6IMI6 304 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 Q71RC1 249 aaPredicted RBP12□□□□□ -0.49
PTPN7-207ENST00000468385 MAATS1Q7Z4T9 603 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 GPSM1Q86YR5 675 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 KRTAP1-3Q8IUG1 177 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 LACC1Q8IV20 430 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 LAS2Q8IYD9 372 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 PDPRQ8NCN5 879 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 FAM13CQ8NE31 585 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 LINC01560Q8TB33 94 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 RBM18Q96H35 190 aaKnown RBP12□□□□□ -0.49
PTPN7-207ENST00000468385 VPS39Q96JC1 886 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 ART5Q96L15 291 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 GAL3ST4Q96RP7 486 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 TIMP4Q99727 224 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 DOHHQ9BU89 302 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 SORBS1Q9BX66 1292 aaKnown RBP12□□□□□ -0.49
PTPN7-207ENST00000468385 PRDM14Q9GZV8 571 aa12□□□□□ -0.49
PTPN7-207ENST00000468385 RPF2Q9H7B2 306 aaKnown RBP12□□□□□ -0.49
PTPN7-207ENST00000468385 PTBP2Q9UKA9 531 aaKnown RBP12□□□□□ -0.49
PTPN7-207ENST00000468385 FLNAP21333 2647 aaKnown RBP11.99□□□□□ -0.49
PTPN7-207ENST00000468385 TUBAL3A6NHL2 446 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 SAP18O00422 153 aaKnown RBP11.99□□□□□ -0.49
PTPN7-207ENST00000468385 PRKRAO75569 313 aaKnown RBP11.99□□□□□ -0.49
PTPN7-207ENST00000468385 IL2RAP01589 272 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 CLPSP04118 112 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 CD1DP15813 335 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 ALOX15P16050 662 aaPredicted RBP11.99□□□□□ -0.49
PTPN7-207ENST00000468385 GDF1P27539 372 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 SERPINB3P29508 390 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 CASP2P42575 452 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 SSR2P43308 183 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 HERVK_113P63132 956 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 ERVK-8P63133 956 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 PLIN5Q00G26 463 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 IRF8Q02556 426 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 SLAMF1Q13291 335 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 BIKQ13323 160 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 FASTKD3Q14CZ7 662 aaKnown RBP11.99□□□□□ -0.49
PTPN7-207ENST00000468385 EBPQ15125 230 aaKnown RBP11.99□□□□□ -0.49
PTPN7-207ENST00000468385 SPRED3Q2MJR0 410 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 C18orf63Q68DL7 685 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 SLC29A4Q7RTT9 530 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 C18orf12Q96KH6 178 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 ZNF597Q96LX8 424 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 KRT12Q99456 494 aa11.99□□□□□ -0.49
PTPN7-207ENST00000468385 ERVK-6Q9BXR3 956 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms