RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 BCAS2O75934 225 aaPredicted RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 IFNA1P01562 189 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 MPC1LP0DKB6 136 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 OR12D1P0DN82 309 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 CTSAP10619 480 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 AMY2BP19961 511 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 GKP32189 559 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 RORAP35398 523 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ETV3P41162 512 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 AFF1P51825 1210 aaKnown RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 PSPHP78330 225 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 SLAMF1Q13291 335 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 RABEPKQ7Z6M1 372 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 SUN5Q8TC36 379 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ASB12Q8WXK4 309 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 OR5P2Q8WZ92 322 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 DNAJA3Q96EY1 480 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 MROQ9BYG7 248 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ZNF358Q9NW07 568 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 GALPQ9UBC7 116 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 MARF1Q9Y4F3 1742 aaKnown RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 MYOCOSA0A1B0GUC4 107 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 C2orf72A6NCS6 295 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 OR6C70A6NIJ9 312 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 LRRN3E7EW58 273 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 COCHO43405 550 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 APOL3O95236 402 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 PLATP00750 562 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 HNF1BP35680 557 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 GRIA1P42261 906 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 MVKQ03426 396 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 SLC18A2Q05940 514 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ZNF648Q5T619 568 aaPredicted RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 ZSWIM9Q86XI8 627 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ZNF440Q8IYI8 595 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 LRRC25Q8N386 305 aaPredicted RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 PSD4Q8NDX1 1056 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 HLA-CQ95604 372 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 PRR11Q96HE9 360 aaPredicted RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 LRRN3Q9H3W5 708 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 PLEKHA3Q9HB20 300 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 RAB9BQ9NP90 201 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 REV1Q9UBZ9 1251 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 SLX4Q8IY92 1834 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 A0A1W2PQU0 124 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 AURKAO14965 403 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 EMC8O43402 210 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 H6PDO95479 791 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 PAK4O96013 591 aaPredicted RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 C8BP07358 591 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 GNAO1P09471 354 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 RNH1P13489 461 aaKnown RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 PRKCAP17252 672 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 CD72P21854 359 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ADH7P40394 386 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 RABIFP47224 123 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 NUDT6P53370 316 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 HADHBP55084 474 aaKnown RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 NR0B2Q15466 257 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 RNF220Q5VTB9 566 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ZDHHC14Q8IZN3 488 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 SLC37A3Q8NCC5 494 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 OR56A3Q8NH54 315 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 TBC1D15Q8TC07 691 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 BMFQ96LC9 184 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 SLC6A7Q99884 636 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ZNF442Q9H7R0 627 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 PIGBOS1A0A0B4J2F0 54 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ITM2AO43736 263 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ADORA3P0DMS8 318 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 G6PDP11413 515 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 AOC1P19801 751 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 FPR1P21462 350 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 DNAJB1P25685 340 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 FOLR3P41439 243 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 MAGEA8P43361 318 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 LMAN2Q12907 356 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ABHD17BQ5VST6 288 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 CILP2Q8IUL8 1156 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 LSM14AQ8ND56 463 aaKnown RBP8.35□□□□□ -1.07
HPS4-209ENST00000466781 PROKR1Q8TCW9 393 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 DIO2Q92813 273 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 BORCS7Q96B45 105 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 HERPUD2Q9BSE4 406 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 DNAJC27Q9NZQ0 273 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 CLEC4EQ9ULY5 219 aa8.35□□□□□ -1.07
HPS4-209ENST00000466781 ISPDA4D126 451 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 SNAPC5O75971 98 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 GSTT2P0CG29 244 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 GTF2F2P13984 249 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 ACRV1P26436 265 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 CST5P28325 142 aaPredicted RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 FRKP42685 505 aaPredicted RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 SOX2P48431 317 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 RIDAP52758 137 aaKnown RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 STC1P52823 247 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 TUBA3CQ13748 450 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 PAFAH1B3Q15102 231 aaKnown RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 ATAD3CQ5T2N8 411 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms