RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 FOLH1Q04609 750 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 MRPL49Q13405 166 aaKnown RBP9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CUL3Q13618 768 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 PCLAFQ15004 111 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 TLR1Q15399 786 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 ACER2Q5QJU3 275 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CCNYL2Q5T2Q4 361 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 SH2D5Q6ZV89 423 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 TRABD2AQ86V40 505 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 ZCCHC7Q8N3Z6 543 aaKnown RBP9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 SLC5A8Q8N695 610 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 ZNF321PQ8N8H1 164 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 NFAM1Q8NET5 270 aaPredicted RBP9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 B3GNT7Q8NFL0 401 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CDC26Q8NHZ8 85 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 ELP5Q8TE02 316 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 AGAP11Q8TF27 550 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 PPWD1Q96BP3 646 aaKnown RBP9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CCDC126Q96EE4 140 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 L3HYPDHQ96EM0 354 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 DGAT2Q96PD7 388 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 LMF1Q96S06 567 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 ZNF382Q96SR6 550 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 MECRQ9BV79 373 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 ZNF717Q9BY31 904 aaPredicted RBP9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 HES7Q9BYE0 225 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 DEFB126Q9BYW3 111 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 OR8D2Q9GZM6 311 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CLMPQ9H6B4 373 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 WDR41Q9HAD4 459 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 KLHL1Q9NR64 748 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 TEX10Q9NXF1 929 aaPredicted RBP9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 SLC17A7Q9P2U7 560 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 MID2Q9UJV3 735 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 TSC22D4Q9Y3Q8 395 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CLDN16Q9Y5I7 305 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 COPG1Q9Y678 874 aaKnown RBP9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CLCA3PQ9Y6N3 262 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 ZNF462Q96JM2 2506 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 CNTRLQ7Z7A1 2325 aa9.09□□□□□ -0.95
RTFDC1-205ENST00000466260 KALRNO60229 2985 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 A0A1W2PR48 441 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 A0A1W2PS29 197 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 C17orf105B2RV13 164 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 UBFD1O14562 309 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 PRKNO60260 465 aaPredicted RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 OR10H2O60403 315 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 SEMA3DO95025 777 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 ESRRBO95718 433 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 KRT6AP02538 564 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 KRT6BP04259 564 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 TROVE2P10155 538 aaKnown RBP eCLIP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 CREB1P16220 341 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 TPP2P29144 1249 aaPredicted RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 TLX1P31314 330 aaPredicted RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 TSFMP43897 325 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 KRT6CP48668 564 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 ALDH9A1P49189 494 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 TNFSF10P50591 281 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 CLCN2P51788 898 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 MAPK12P53778 367 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 PMP22Q01453 160 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 HMGCS1Q01581 520 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 SLC18A2Q05940 514 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 LCP2Q13094 533 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 RIPK1Q13546 671 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 SERTAD2Q14140 314 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 NR6A1Q15406 480 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 ELAVL1Q15717 326 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 SNCBQ16143 134 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 IMPG1Q17R60 797 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 HHATQ5VTY9 493 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 LIPMQ5VYY2 423 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 DESI1Q6ICB0 168 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 SPINK14Q6IE38 97 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 C16orf47Q6ZP98 133 aaPredicted RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 ZCCHC23Q6ZST2 131 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 COMMD6Q7Z4G1 85 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 RPS19BP1Q86WX3 136 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 C10orf107Q8IVU9 208 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 LRRC34Q8IZ02 419 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 MMP21Q8N119 569 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 TMEM132CQ8N3T6 1108 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 C1orf52Q8N6N3 182 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 APCDD1LQ8NCL9 501 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 AGR3Q8TD06 166 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 SLC2A12Q8TD20 617 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 LRRC8CQ8TDW0 803 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 ANKRD9Q96BM1 317 aaPredicted RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 VMP1Q96GC9 406 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 SIGLEC12Q96PQ1 595 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 ELAC2Q9BQ52 826 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 UTP23Q9BRU9 249 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 CNPPD1Q9BV87 410 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 EBPLQ9BY08 206 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 SLC29A3Q9BZD2 475 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 DDX31Q9H8H2 851 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 AHSPQ9NZD4 102 aa9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 ZNF223Q9UK11 482 aaPredicted RBP9.08□□□□□ -0.96
RTFDC1-205ENST00000466260 STK38LQ9Y2H1 464 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms