RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 MCATQ8IVS2 390 aaKnown RBP17.61■□□□□ 0.41
CAPN3-209ENST00000466222 MICU2Q8IYU8 434 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 DNAJC22Q8N4W6 341 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 ZNF555Q8NEP9 628 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 IFI44Q8TCB0 444 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 FIG4Q92562 907 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 SLC47A1Q96FL8 570 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 COG8Q96MW5 612 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 MUS81Q96NY9 551 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 RBM4BQ9BQ04 359 aaKnown RBP17.61■□□□□ 0.41
CAPN3-209ENST00000466222 RBM4Q9BWF3 364 aaKnown RBP17.61■□□□□ 0.41
CAPN3-209ENST00000466222 SIRT5Q9NXA8 310 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 BLOC1S6Q9UL45 172 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 CDC14AQ9UNH5 594 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 MAN2B2Q9Y2E5 1009 aa17.61■□□□□ 0.41
CAPN3-209ENST00000466222 CXCR6O00574 342 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 SEMA3DO95025 777 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 FKBP9O95302 570 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 RPLP0P05388 317 aaKnown RBP17.6■□□□□ 0.41
CAPN3-209ENST00000466222 SLC35G6P0C7Q6 338 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 ZNF806P0C7X5 589 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 CKMT1AP12532 417 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 ACPPP15309 386 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 EFNA1P20827 205 aaPredicted RBP17.6■□□□□ 0.41
CAPN3-209ENST00000466222 SOX11P35716 441 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 SSR2P43308 183 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 DAB2P98082 770 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 UGT8Q16880 541 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 PRSS53Q2L4Q9 553 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 PGS1Q32NB8 556 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 PLXDC1Q8IUK5 500 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 OR2L5Q8NG80 312 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 OR13F1Q8NGS4 319 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 UTP15Q8TED0 518 aaKnown RBP17.6■□□□□ 0.41
CAPN3-209ENST00000466222 FAM162AQ96A26 154 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 RERGQ96A58 199 aaPredicted RBP17.6■□□□□ 0.41
CAPN3-209ENST00000466222 METTL2AQ96IZ6 378 aaKnown RBP17.6■□□□□ 0.41
CAPN3-209ENST00000466222 OSBPL10Q9BXB5 764 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 KCNH6Q9H252 994 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 RMND5AQ9H871 391 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 DNAAF2Q9NVR5 837 aaKnown RBP17.6■□□□□ 0.41
CAPN3-209ENST00000466222 GALNT8Q9NY28 637 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 ADAMTS9Q9P2N4 1935 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 GOLGA4Q13439 2230 aaKnown RBP17.6■□□□□ 0.41
CAPN3-209ENST00000466222 TRBV5-3A0A0A0MS03 114 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 GABRR3A8MPY1 467 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 ABCB7O75027 752 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 CST1P01037 141 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 IL3P08700 152 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 CERS1P27544 350 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 BTN3A2P78410 334 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 ZNF763Q0D2J5 394 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 RFX4Q33E94 735 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 DEFB134Q4QY38 66 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 TMEM35AQ53FP2 167 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 LRIF1Q5T3J3 769 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 DBX2Q6ZNG2 339 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 MSANTD1Q6ZTZ1 278 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 CSNK1A1LQ8N752 337 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 RCBTB1Q8NDN9 531 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 OR10A6Q8NH74 314 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 NT5CQ8TCD5 201 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 RNF31Q96EP0 1072 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 TCTN2Q96GX1 697 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 AHSPQ9NZD4 102 aa17.6■□□□□ 0.41
CAPN3-209ENST00000466222 A0A096LPI6 279 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 PRKRAO75569 313 aaKnown RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 DNAJB5O75953 348 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 PNLIPP16233 465 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 GSTM2P28161 218 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 MLLT3P42568 568 aaPredicted RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 GABRA4P48169 554 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 MAPK12P53778 367 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 RELAQ04206 551 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 RGS1Q08116 209 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 IL18R1Q13478 541 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 GPR107Q5VW38 600 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 WDR74Q6RFH5 385 aaPredicted RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 ANKRD46Q86W74 232 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 CALHM3Q86XJ0 350 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 ACOT4Q8N9L9 421 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 OR5K1Q8NHB7 308 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 FNDC8Q8TC99 324 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 RHBDD1Q8TEB9 315 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 TM4SF18Q96CE8 201 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 THAP11Q96EK4 314 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 KCNC2Q96PR1 638 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 DDX31Q9H8H2 851 aaKnown RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 PARD6AQ9NPB6 346 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 SEMA4GQ9NTN9 838 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 TEX10Q9NXF1 929 aaPredicted RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 C5AR2Q9P296 337 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 A0A0A6YYD5 115 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 SEC14L2O76054 403 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 ATE1O95260 518 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 MED26O95402 600 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 ZBTB11O95625 1053 aaPredicted RBP17.59■□□□□ 0.41
CAPN3-209ENST00000466222 LAMP1P11279 417 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 PRPS1L1P21108 318 aa17.59■□□□□ 0.41
CAPN3-209ENST00000466222 HIST1H1TP22492 207 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms