RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 PAQR8Q8TEZ7 354 aa8.54□□□□□ -1.04
APP-213ENST00000464867 SLC44A1Q8WWI5 657 aa8.54□□□□□ -1.04
APP-213ENST00000464867 AKAP1Q92667 903 aaKnown RBP eCLIP8.54□□□□□ -1.04
APP-213ENST00000464867 CAVIN3Q969G5 261 aa8.54□□□□□ -1.04
APP-213ENST00000464867 MARK4Q96L34 752 aa8.54□□□□□ -1.04
APP-213ENST00000464867 ZNF597Q96LX8 424 aa8.54□□□□□ -1.04
APP-213ENST00000464867 FANCD2OSQ96PS1 177 aa8.54□□□□□ -1.04
APP-213ENST00000464867 UGT2B28Q9BY64 529 aa8.54□□□□□ -1.04
APP-213ENST00000464867 LRRC40Q9H9A6 602 aa8.54□□□□□ -1.04
APP-213ENST00000464867 CCDC177Q9NQR7 707 aaPredicted RBP8.54□□□□□ -1.04
APP-213ENST00000464867 COPS7AQ9UBW8 275 aa8.54□□□□□ -1.04
APP-213ENST00000464867 MAPRE3Q9UPY8 281 aa8.54□□□□□ -1.04
APP-213ENST00000464867 SLC6A5Q9Y345 797 aa8.54□□□□□ -1.04
APP-213ENST00000464867 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.54□□□□□ -1.04
APP-213ENST00000464867 MALRD1Q5VYJ5 2156 aa8.54□□□□□ -1.04
APP-213ENST00000464867 A0A087X0T9 212 aa8.53□□□□□ -1.04
APP-213ENST00000464867 FAM234BA2RU67 622 aa8.53□□□□□ -1.04
APP-213ENST00000464867 GRID2IPA4D2P6 1211 aa8.53□□□□□ -1.04
APP-213ENST00000464867 LRRC14BA6NHZ5 514 aa8.53□□□□□ -1.04
APP-213ENST00000464867 LRRC3CA6NJW4 275 aa8.53□□□□□ -1.04
APP-213ENST00000464867 H0Y3Z8 333 aa8.53□□□□□ -1.04
APP-213ENST00000464867 OVOL3O00110 214 aa8.53□□□□□ -1.04
APP-213ENST00000464867 KIAA0513O60268 411 aa8.53□□□□□ -1.04
APP-213ENST00000464867 LCMT2O60294 686 aaKnown RBP8.53□□□□□ -1.04
APP-213ENST00000464867 PSIP1O75475 530 aaKnown RBP8.53□□□□□ -1.04
APP-213ENST00000464867 NDUFS3O75489 264 aa8.53□□□□□ -1.04
APP-213ENST00000464867 ACTL6AO96019 429 aa8.53□□□□□ -1.04
APP-213ENST00000464867 FAM228BP0C875 321 aa8.53□□□□□ -1.04
APP-213ENST00000464867 ZNF888P0CJ79 500 aaPredicted RBP8.53□□□□□ -1.04
APP-213ENST00000464867 TNNI3P19429 210 aa8.53□□□□□ -1.04
APP-213ENST00000464867 CHMP24386 653 aa8.53□□□□□ -1.04
APP-213ENST00000464867 LOXP28300 417 aaPredicted RBP8.53□□□□□ -1.04
APP-213ENST00000464867 CDKN1AP38936 164 aa8.53□□□□□ -1.04
APP-213ENST00000464867 HSD17B7P56937 341 aa8.53□□□□□ -1.04
APP-213ENST00000464867 DSCR9P59020 149 aa8.53□□□□□ -1.04
APP-213ENST00000464867 RNF4P78317 190 aa8.53□□□□□ -1.04
APP-213ENST00000464867 LOXL1Q08397 574 aaPredicted RBP8.53□□□□□ -1.04
APP-213ENST00000464867 MPEG1Q2M385 716 aa8.53□□□□□ -1.04
APP-213ENST00000464867 DNM1P46Q6ZS02 220 aa8.53□□□□□ -1.04
APP-213ENST00000464867 IL17RELQ6ZVW7 336 aa8.53□□□□□ -1.04
APP-213ENST00000464867 C17orf64Q86WR6 236 aa8.53□□□□□ -1.04
APP-213ENST00000464867 CDKL3Q8IVW4 592 aaPredicted RBP8.53□□□□□ -1.04
APP-213ENST00000464867 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.53□□□□□ -1.04
APP-213ENST00000464867 GPATCH11Q8N954 259 aa8.53□□□□□ -1.04
APP-213ENST00000464867 CNEP1R1Q8N9A8 125 aa8.53□□□□□ -1.04
APP-213ENST00000464867 FAM13CQ8NE31 585 aa8.53□□□□□ -1.04
APP-213ENST00000464867 ANKRD9Q96BM1 317 aaPredicted RBP8.53□□□□□ -1.04
APP-213ENST00000464867 OR8D2Q9GZM6 311 aa8.53□□□□□ -1.04
APP-213ENST00000464867 C10orf88Q9H8K7 445 aa8.53□□□□□ -1.04
APP-213ENST00000464867 CHODLQ9H9P2 273 aa8.53□□□□□ -1.04
APP-213ENST00000464867 L2HGDHQ9H9P8 463 aa8.53□□□□□ -1.04
APP-213ENST00000464867 PRTFDC1Q9NRG1 225 aa8.53□□□□□ -1.04
APP-213ENST00000464867 CATSPERZQ9NTU4 200 aa8.53□□□□□ -1.04
APP-213ENST00000464867 LIPT1Q9Y234 373 aa8.53□□□□□ -1.04
APP-213ENST00000464867 MRPS33Q9Y291 106 aaKnown RBP8.53□□□□□ -1.04
APP-213ENST00000464867 WIF1Q9Y5W5 379 aa8.53□□□□□ -1.04
APP-213ENST00000464867 GFYI3L273 518 aa8.52□□□□□ -1.05
APP-213ENST00000464867 PSMD3O43242 534 aa8.52□□□□□ -1.05
APP-213ENST00000464867 OR1F1O43749 312 aa8.52□□□□□ -1.05
APP-213ENST00000464867 ZBTB14O43829 449 aa8.52□□□□□ -1.05
APP-213ENST00000464867 SSX4O60224 188 aa8.52□□□□□ -1.05
APP-213ENST00000464867 IGHV4-39P01824 125 aa8.52□□□□□ -1.05
APP-213ENST00000464867 SERPING1P05155 500 aa8.52□□□□□ -1.05
APP-213ENST00000464867 HPNP05981 417 aa8.52□□□□□ -1.05
APP-213ENST00000464867 FESP07332 822 aa8.52□□□□□ -1.05
APP-213ENST00000464867 PPP3CBP16298 524 aa8.52□□□□□ -1.05
APP-213ENST00000464867 ZNF16P17020 682 aaPredicted RBP8.52□□□□□ -1.05
APP-213ENST00000464867 SERPINB3P29508 390 aa8.52□□□□□ -1.05
APP-213ENST00000464867 PPP2R1BP30154 601 aa8.52□□□□□ -1.05
APP-213ENST00000464867 SLCO1A2P46721 670 aa8.52□□□□□ -1.05
APP-213ENST00000464867 MASP1P48740 699 aa8.52□□□□□ -1.05
APP-213ENST00000464867 CDK9P50750 372 aaKnown RBP8.52□□□□□ -1.05
APP-213ENST00000464867 UBE2HP62256 183 aa8.52□□□□□ -1.05
APP-213ENST00000464867 ACTG1P63261 375 aa8.52□□□□□ -1.05
APP-213ENST00000464867 ID3Q02535 119 aa8.52□□□□□ -1.05
APP-213ENST00000464867 ASPHQ12797 758 aa8.52□□□□□ -1.05
APP-213ENST00000464867 CDK5R2Q13319 367 aa8.52□□□□□ -1.05
APP-213ENST00000464867 SEMA3AQ14563 771 aa8.52□□□□□ -1.05
APP-213ENST00000464867 RPS6KA1Q15418 735 aa8.52□□□□□ -1.05
APP-213ENST00000464867 KLHL38Q2WGJ6 581 aa8.52□□□□□ -1.05
APP-213ENST00000464867 ZNF791Q3KP31 576 aaPredicted RBP8.52□□□□□ -1.05
APP-213ENST00000464867 PIGGQ5H8A4 983 aa8.52□□□□□ -1.05
APP-213ENST00000464867 OR2A2Q6IF42 318 aa8.52□□□□□ -1.05
APP-213ENST00000464867 FAM166AQ6J272 317 aa8.52□□□□□ -1.05
APP-213ENST00000464867 CLEC2AQ6UVW9 174 aa8.52□□□□□ -1.05
APP-213ENST00000464867 LINC00523Q86TU6 105 aa8.52□□□□□ -1.05
APP-213ENST00000464867 GRAMD2AQ8IUY3 354 aa8.52□□□□□ -1.05
APP-213ENST00000464867 SLC15A4Q8N697 577 aa8.52□□□□□ -1.05
APP-213ENST00000464867 OR13J1Q8NGT2 312 aa8.52□□□□□ -1.05
APP-213ENST00000464867 OR14A16Q8NHC5 309 aa8.52□□□□□ -1.05
APP-213ENST00000464867 FBXW5Q969U6 566 aa8.52□□□□□ -1.05
APP-213ENST00000464867 SPACA9Q96E40 222 aaPredicted RBP8.52□□□□□ -1.05
APP-213ENST00000464867 PGM2Q96G03 612 aa8.52□□□□□ -1.05
APP-213ENST00000464867 KRTAP9-9Q9BYP9 154 aa8.52□□□□□ -1.05
APP-213ENST00000464867 KRTAP9-4Q9BYQ2 154 aa8.52□□□□□ -1.05
APP-213ENST00000464867 PIH1D1Q9NWS0 290 aaKnown RBP8.52□□□□□ -1.05
APP-213ENST00000464867 INTUQ9ULD6 942 aa8.52□□□□□ -1.05
APP-213ENST00000464867 ALPK2Q86TB3 2170 aa8.51□□□□□ -1.05
APP-213ENST00000464867 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.51□□□□□ -1.05
APP-213ENST00000464867 A0A1W2PNV4 684 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms