RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 OR14A16Q8NHC5 309 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 C16orf78Q8WTQ4 265 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 PPWD1Q96BP3 646 aaKnown RBP13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 CCT7Q99832 543 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 LRTM1Q9HBL6 345 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 TEKT2Q9UIF3 430 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 CES1P1Q9UKY3 287 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 PSME2Q9UL46 239 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 PPIEQ9UNP9 301 aaKnown RBP13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 DLGAP4Q9Y2H0 992 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 POLR3HQ9Y535 204 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 CNTRLQ7Z7A1 2325 aa13.55□□□□□ -0.24
SQSTM1-205ENST00000464493 LSM1O15116 133 aaKnown RBP13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 OR10H2O60403 315 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 IL3P08700 152 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 SLC35E2P0CK97 266 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 DRD2P14416 443 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 ALDH9A1P49189 494 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 RPL14P50914 215 aaKnown RBP13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 CLCN2P51788 898 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 XKP51811 444 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 ZNF763Q0D2J5 394 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 KLRB1Q12918 225 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 MFAP5Q13361 173 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 HEPACAMQ14CZ8 416 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 ABHD17BQ5VST6 288 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 ATG16L1Q676U5 607 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 SLC48A1Q6P1K1 146 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 KIRREL3Q8IZU9 778 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 MMP21Q8N119 569 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 KIF2BQ8N4N8 673 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 ZADH2Q8N4Q0 377 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 SLC5A8Q8N695 610 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 RBMXL3Q8N7X1 1067 aaKnown RBP13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 APCDD1LQ8NCL9 501 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 RAB3IL1Q8TBN0 382 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 NCLNQ969V3 563 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 VMP1Q96GC9 406 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 ZNF354BQ96LW1 612 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 SORT1Q99523 831 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 PELOQ9BRX2 385 aaKnown RBP13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 DEFB126Q9BYW3 111 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 ACBD3Q9H3P7 528 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 EPS8L2Q9H6S3 715 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 MANSC1Q9H8J5 431 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 PFDN4Q9NQP4 134 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 THAP1Q9NVV9 213 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 ZNF446Q9NWS9 450 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 STMN3Q9NZ72 180 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 HEY2Q9UBP5 337 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 WBP11Q9Y2W2 641 aaKnown RBP13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 CROCCQ5TZA2 2017 aa13.54□□□□□ -0.24
SQSTM1-205ENST00000464493 B8ZZF3 427 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 DYRK3O43781 588 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 SKAP2O75563 359 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 DDAH2O95865 285 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 GALNSP34059 522 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 C2orf80Q0P641 193 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 C19orf57Q0VDD7 668 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 MEP1AQ16819 746 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 GALNTL6Q49A17 601 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 RFTN2Q52LD8 501 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 XKR7Q5GH72 579 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 FCRLBQ6BAA4 426 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 DGAT2L6Q6ZPD8 337 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 OR1N1Q8NGS0 311 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 SLC2A12Q8TD20 617 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 RIT1Q92963 219 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 SENP5Q96HI0 755 aaPredicted RBP13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 PPP3R2Q96LZ3 170 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 C3orf30Q96M34 536 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 MFRPQ9BY79 579 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 OR8D2Q9GZM6 311 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 HAO1Q9UJM8 370 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 TMED5Q9Y3A6 229 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 ZNF780BQ9Y6R6 833 aa13.53□□□□□ -0.24
SQSTM1-205ENST00000464493 TRBV11-1A0A0K0K1C0 115 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 ATP6AP2A0A1C7CYW4 349 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 DYTNA2CJ06 578 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 PEX11AO75192 247 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 SNNO75324 88 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 ERAL1O75616 437 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 ATP6AP2O75787 350 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 CPMP14384 443 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 PORP16435 677 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 CSNK2A2P19784 350 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 CD97P48960 835 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 PPP2R2AP63151 447 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 RPL38P63173 70 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 ZNF750Q32MQ0 723 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 NADK2Q4G0N4 442 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 ACER2Q5QJU3 275 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 RPS19BP1Q86WX3 136 aaKnown RBP13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 CRLF3Q8IUI8 442 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 CDC26Q8NHZ8 85 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 HAS2Q92819 552 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 KLHL29Q96CT2 875 aa13.52□□□□□ -0.25
SQSTM1-205ENST00000464493 C19orf60Q96EN9 201 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms