RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 GUCY2DQ02846 1103 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 SLC10A1Q14973 349 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 SETDB1Q15047 1291 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 FAM83EQ2M2I3 478 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 SLC22A10Q63ZE4 541 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 SPNS3Q6ZMD2 512 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 CDH24Q86UP0 819 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 C9orf40Q8IXQ3 194 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 CENPLQ8N0S6 344 aaPredicted RBP16.5■□□□□ 0.23
SSB-206ENST00000461708 RPRMLQ8N4K4 120 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 OR5M3Q8NGP4 307 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 FBF1Q8TES7 1133 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 PAQR8Q8TEZ7 354 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 ANP32BQ92688 251 aaKnown RBP16.5■□□□□ 0.23
SSB-206ENST00000461708 REPS1Q96D71 796 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 PYCARDQ9ULZ3 195 aa16.5■□□□□ 0.23
SSB-206ENST00000461708 G3V3Y1 287 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 SAP18O00422 153 aaKnown RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 PROM1O43490 865 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 WDR1O75083 606 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 ALOX15P16050 662 aaPredicted RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 GALNSP34059 522 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 BUD31P41223 144 aaPredicted RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 PIK3CGP48736 1102 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 ALDH18A1P54886 795 aaKnown RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 RIPPLY3P57055 190 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 PHEXP78562 749 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 FOLH1Q04609 750 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 ASPHQ12797 758 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 CUL3Q13618 768 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 ACAP2Q15057 778 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 PCBP2Q15366 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
SSB-206ENST00000461708 SPRED3Q2MJR0 410 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 LYPD8Q6UX82 237 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 ZDHHC24Q6UX98 284 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 B3GNT6Q6ZMB0 384 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 CCDC71Q8IV32 467 aaPredicted RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 OR4N5Q8IXE1 308 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 DMRTC2Q8IXT2 367 aaPredicted RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 TEX9Q8N6V9 391 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 SARAFQ96BY9 339 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 NXNL1Q96CM4 212 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 SPACA9Q96E40 222 aaPredicted RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 TTYH2Q9BSA4 534 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 ZNF717Q9BY31 904 aaPredicted RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 DDX31Q9H8H2 851 aaKnown RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 ACTR8Q9H981 624 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 PRM3Q9NNZ6 103 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 LYARQ9NX58 379 aaKnown RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 QPCTLQ9NXS2 382 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 TUBA8Q9NY65 449 aaPredicted RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 CNIH4Q9P003 139 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 KCNN3Q9UGI6 736 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 ANGPTL3Q9Y5C1 460 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 PCDHGB3Q9Y5G1 929 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.49■□□□□ 0.23
SSB-206ENST00000461708 NINQ8N4C6 2090 aa16.49■□□□□ 0.23
SSB-206ENST00000461708 NF1P21359 2839 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 NKX2-6A6NCS4 301 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 FAM47E-STBD1D6RA91 191 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 SH3BGRLO75368 114 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 NADKO95544 446 aaPredicted RBP16.48■□□□□ 0.23
SSB-206ENST00000461708 GPR75O95800 540 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 C2P06681 752 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 FBXO45P0C2W1 286 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 GLI4P10075 376 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 DNASE1L1P49184 302 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 MAN2A2P49641 1150 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 HNRNPH2P55795 449 aaKnown RBP16.48■□□□□ 0.23
SSB-206ENST00000461708 DDX39BQ13838 428 aaKnown RBP16.48■□□□□ 0.23
SSB-206ENST00000461708 MRM1Q6IN84 353 aaKnown RBP16.48■□□□□ 0.23
SSB-206ENST00000461708 ADGRD1Q6QNK2 874 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 CCDC25Q86WR0 208 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 FBXW8Q8N3Y1 598 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 MTERF1Q99551 399 aaKnown RBP16.48■□□□□ 0.23
SSB-206ENST00000461708 SORBS1Q9BX66 1292 aaKnown RBP16.48■□□□□ 0.23
SSB-206ENST00000461708 UCK2Q9BZX2 261 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 TNFRSF10DQ9UBN6 386 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 BOKQ9UMX3 212 aaPredicted RBP16.48■□□□□ 0.23
SSB-206ENST00000461708 ASB4Q9Y574 426 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 TNPO3Q9Y5L0 923 aaKnown RBP16.48■□□□□ 0.23
SSB-206ENST00000461708 FAM215AQ9Y5M1 114 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 LIPGQ9Y5X9 500 aa16.48■□□□□ 0.23
SSB-206ENST00000461708 A0A0A6YYD5 115 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 IQANK1A0A1B0GTG1 560 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 OR6C76A6NM76 312 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 FAM90A27PA6NNH2 459 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 FOXE1O00358 373 aaPredicted RBP16.47■□□□□ 0.23
SSB-206ENST00000461708 SERPINB3P29508 390 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 C2orf54Q08AI8 447 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 WLSQ5T9L3 541 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 C18orf63Q68DL7 685 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 RTL6Q6ICC9 239 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 ZNF585AQ6P3V2 769 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 DGAT2L6Q6ZPD8 337 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 SLC29A4Q7RTT9 530 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 ZNF572Q7Z3I7 529 aaPredicted RBP16.47■□□□□ 0.23
SSB-206ENST00000461708 CLYBLQ8N0X4 340 aa16.47■□□□□ 0.23
SSB-206ENST00000461708 LRRC25Q8N386 305 aaPredicted RBP16.47■□□□□ 0.23
SSB-206ENST00000461708 L3MBTL4Q8NA19 623 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms