RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 PRR23D2P0DMB1 279 aaPredicted RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 IGHV4-38-2P0DP08 117 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 LIFP15018 202 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 PAICSP22234 425 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 ITGA3P26006 1051 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 PPP2R1AP30153 589 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 OTX2P32243 289 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 SLC1A3P43003 542 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 GABPAQ06546 454 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CNTN1Q12860 1018 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 GRIN2AQ12879 1464 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 GPR17Q13304 367 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 GPR50Q13585 617 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 DDX39BQ13838 428 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 KEAP1Q14145 624 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 LRRC37A5PQ49AS3 106 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 ZNF585BQ52M93 769 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 XKR6Q5GH73 641 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 PPRC1Q5VV67 1664 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 IL23RQ5VWK5 629 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 ARHGAP17Q68EM7 881 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 SNRNP48Q6IEG0 339 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 CYP4V2Q6ZWL3 525 aaPredicted RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 TRMT1LQ7Z2T5 733 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 ERASQ7Z444 233 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CTAGE6Q86UF2 777 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 GPC2Q8N158 579 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 IQCF1Q8N6M8 205 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 TCEANCQ8N8B7 351 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 EIF1ADQ8N9N8 165 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 GPRC5AQ8NFJ5 357 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 TRIM58Q8NG06 486 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 OR6M1Q8NGM8 313 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 BRSK1Q8TDC3 778 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 GANCQ8TET4 914 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 PRG4Q92954 1404 aaPredicted RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 TMEM143Q96AN5 459 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 ST6GAL2Q96JF0 529 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 RPGRIP1Q96KN7 1286 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 TCEANC2Q96MN5 208 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 S1PR3Q99500 378 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 AGPAT1Q99943 283 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 JPH2Q9BR39 696 aaPredicted RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 CFAP74Q9C0B2 1584 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 GANQ9H2C0 597 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 LRRC40Q9H9A6 602 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 IBTKQ9P2D0 1353 aaPredicted RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 ZNF319Q9P2F9 582 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 NPC1L1Q9UHC9 1359 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 FBXL4Q9UKA2 621 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 MRTO4Q9UKD2 239 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 PROCRQ9UNN8 238 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 OR1A2Q9Y585 309 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CDC42BPBQ9Y5S2 1711 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CKAP5Q14008 2032 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 IQSEC2Q5JU85 1478 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 ARHGAP31Q2M1Z3 1444 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 NSD2O96028 1365 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 C15orf38-AP3S2A0A0A6YYH1 394 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 ATP6AP2A0A1C7CYW4 349 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 XKRY2A2RUG3 117 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 ZSCAN5BA6NJL1 495 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 SRRM4A7MD48 611 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 K7EQM0 130 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 KRT86O43790 486 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 ECE2O60344 883 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 TBX19O60806 448 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 SAP30O75446 220 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CDK2AP2O75956 126 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 RHOBTB1O94844 696 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 ASNSP08243 561 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 SERPINF2P08697 491 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 FRMD6-AS1P0C7T7 363 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CT45A8P0DMV1 189 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CT45A9P0DMV2 189 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 TNNI3P19429 210 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CCNCP24863 283 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 ACKR3P25106 362 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CEACAM8P31997 349 aaPredicted RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 MTIF2P46199 727 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 ATP5OP48047 213 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 MYBPC1Q00872 1141 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 LTBQ06643 244 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 BTG3Q14201 252 aaPredicted RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 GRB14Q14449 540 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 KRT81Q14533 505 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 EXOSC7Q15024 291 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 PDK4Q16654 411 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 IMMTQ16891 758 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 KCTD21Q4G0X4 260 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CT45A2Q5DJT8 189 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 LIPKQ5VXJ0 399 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 NCR3LG1Q68D85 454 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 KIRREL3Q8IZU9 778 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CCDC197Q8NCU1 140 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 STKLD1Q8NE28 680 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 OR2T3Q8NH03 318 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 CD99L2Q8TCZ2 262 aa2.63□□□□□ -1.99
HPS3-203ENST00000460822 U2AF1L4Q8WU68 220 aaKnown RBP2.63□□□□□ -1.99
HPS3-203ENST00000460822 SMPDL3AQ92484 453 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms