RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 STX18Q9P2W9 335 aaKnown RBP3.05□□□□□ -1.92
VPS8-215ENST00000460158 DBF4Q9UBU7 674 aaPredicted RBP3.05□□□□□ -1.92
VPS8-215ENST00000460158 LRWD1Q9UFC0 647 aa3.05□□□□□ -1.92
VPS8-215ENST00000460158 RNF150Q9ULK6 438 aa3.05□□□□□ -1.92
VPS8-215ENST00000460158 ABT1Q9ULW3 272 aaKnown RBP3.05□□□□□ -1.92
VPS8-215ENST00000460158 ENTPD4Q9Y227 616 aa3.05□□□□□ -1.92
VPS8-215ENST00000460158 PRELID1Q9Y255 219 aa3.05□□□□□ -1.92
VPS8-215ENST00000460158 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.05□□□□□ -1.92
VPS8-215ENST00000460158 KANK1Q14678 1352 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 PCP4L1A6NKN8 68 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 A8MUI8 341 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 SMIM1B2RUZ4 78 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 PSMD11O00231 422 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 HIP1O00291 1037 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 CHADO15335 359 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 ZNF208O43345 1280 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 SULT1B1O43704 296 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 CAVIN2O95810 425 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 CXCL10P02778 98 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 SP1P08047 785 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 HMBSP08397 361 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 RAB40ALP0C0E4 278 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 IQCF3P0C7M6 154 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 FRMD6-AS1P0C7T7 363 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 PRPS2P11908 318 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 F3P13726 295 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 LIFP15018 202 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 TCF4P15884 667 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 ZNF24P17028 368 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 PRKACAP17612 351 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 CYP2B6P20813 491 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 CPN2P22792 545 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 AZGP1P25311 298 aaKnown RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 MARCKSP29966 332 aaPredicted RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 SLC6A6P31641 620 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 CSTF2P33240 577 aaKnown RBP eCLIP3.04□□□□□ -1.92
VPS8-215ENST00000460158 CEBPDP49716 269 aaPredicted RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 B3GALT5-AS1P59052 145 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 IRX4P78413 519 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 BASP1P80723 227 aaKnown RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 MAT1AQ00266 395 aaKnown RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 HSF2Q03933 536 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 ZNF177Q13360 481 aaPredicted RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 XRCC4Q13426 336 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 KRT81Q14533 505 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 AANATQ16613 207 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 FAM83EQ2M2I3 478 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 SYT14P1Q58G82 188 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 SPANXN2Q5MJ10 180 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 NCR3LG1Q68D85 454 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 KCTD11Q693B1 232 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 TXNRD3NBQ6F5E7 133 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 MFSD12Q6NUT3 480 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 DEGS2Q6QHC5 323 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 CEACAM20Q6UY09 585 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 DLEU7Q6UYE1 221 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 TRMT10CQ7L0Y3 403 aaKnown RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 BZW1Q7L1Q6 419 aaKnown RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 ARHGAP22Q7Z5H3 698 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 RNF10Q8N5U6 811 aaKnown RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 COMMD1Q8N668 190 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 RNF148Q8N7C7 305 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 NPEPL1Q8NDH3 523 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 FAM71CQ8NEG0 241 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 TRPV1Q8NER1 839 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 OR10V1Q8NGI7 309 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 RAB3IL1Q8TBN0 382 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 SLC2A14Q8TDB8 520 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 SSMEM1Q8WWF3 244 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 ATL1Q8WXF7 558 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 RIT1Q92963 219 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 ESAMQ96AP7 390 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 KIAA1143Q96AT1 154 aaPredicted RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 C16orf58Q96GQ5 468 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 TRNT1Q96Q11 434 aaKnown RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 KCNS3Q9BQ31 491 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 NUP58Q9BVL2 599 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 FN3KRPQ9HA64 309 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 NEK6Q9HC98 313 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 SDHAF3Q9NRP4 125 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 FAM207AQ9NSI2 230 aaPredicted RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 ECHDC1Q9NTX5 307 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 DDX28Q9NUL7 540 aaKnown RBP3.04□□□□□ -1.92
VPS8-215ENST00000460158 SLCO1C1Q9NYB5 712 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 NDUFA13Q9P0J0 144 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 CHRNA9Q9UGM1 479 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 DAPK2Q9UIK4 370 aa3.04□□□□□ -1.92
VPS8-215ENST00000460158 KIF27Q86VH2 1401 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 SH3TC1Q8TE82 1336 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 IGLV9-49A0A0B4J1Y8 123 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 FAM240BA0A1B0GVZ2 78 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 NEMP2A6NFY4 417 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 OR52A4PA6NMU1 304 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 LRRIQ3A6PVS8 624 aaPredicted RBP3.03□□□□□ -1.92
VPS8-215ENST00000460158 PMS2P5A8MQ11 134 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 CLDN4O14493 209 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 PTGESO14684 152 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 AKR7A2O43488 359 aa3.03□□□□□ -1.92
VPS8-215ENST00000460158 RNASEH1O60930 286 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms