RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 BMP8BP34820 402 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 DLSTP36957 453 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 NR4A2P43354 598 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 MAGEA3P43357 314 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 MAP2K4P45985 399 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 RAP2BP61225 183 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 BMP8AQ7Z5Y6 402 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 NUDT13Q86X67 352 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 OR5H6Q8NGV6 325 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 BBS10Q8TAM1 723 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 SUSD6Q92537 303 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ZNF514Q96K75 400 aaPredicted RBP9.36□□□□□ -0.91
UFD1-205ENST00000459854 ADAD1Q96M93 576 aaKnown RBP9.36□□□□□ -0.91
UFD1-205ENST00000459854 OR14A2Q96R54 314 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ZNF382Q96SR6 550 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 PAAF1Q9BRP4 392 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 GPR88Q9GZN0 384 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 DOCK5Q9H7D0 1870 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 MYH11P35749 1972 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ANKRD33BA6NCL7 494 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 NUDT19A8MXV4 375 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 HSBP1L1C9JCN9 74 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 H3BUI4 141 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 SDHDO14521 159 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ECI2O75521 394 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 TSPAN15O95858 294 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 UCHL1P09936 223 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 BMP1P13497 986 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 LMO2P25791 158 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 MMP12P39900 470 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CASP3P42574 277 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 MAGEA11P43364 429 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ERVK-25P63136 954 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 HTRA4P83105 476 aaPredicted RBP9.36□□□□□ -0.91
UFD1-205ENST00000459854 PUM1Q14671 1186 aaKnown RBP eCLIP9.36□□□□□ -0.91
UFD1-205ENST00000459854 FRG2Q64ET8 278 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 REEP3Q6NUK4 255 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 SLC27A4Q6P1M0 643 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 KCTD9Q7L273 389 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 FRG2BQ96QU4 278 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 TXLNGYQ9BZA5 131 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 SACM1LQ9NTJ5 587 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ICMTO60725 284 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 MATN4O95460 622 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 TFP02787 698 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 MAN2A2P49641 1150 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CRISP1P54107 249 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 RAB33AQ14088 237 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 GANABQ14697 944 aaKnown RBP9.36□□□□□ -0.91
UFD1-205ENST00000459854 GPR19Q15760 415 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ZNF678Q5SXM1 525 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 NPAS3Q8IXF0 933 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ZNF565Q8N9K5 539 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ANKRD53Q8N9V6 530 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 RHEBL1Q8TAI7 183 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 FERD3LQ96RJ6 166 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 PBX4Q9BYU1 374 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 SIAEQ9HAT2 523 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ERVK13-1Q9NX77 482 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 NLKQ9UBE8 527 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 NAALAD2Q9Y3Q0 740 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 YIPF1Q9Y548 306 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 A0A0D9SG52 128 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CXorf49A8MYA2 514 aaPredicted RBP9.36□□□□□ -0.91
UFD1-205ENST00000459854 ZNF878C9JN71 531 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 J3QLW9 94 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 MANBAO00462 879 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CLDN5O00501 218 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CLDN4O14493 209 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 SOCS2O14508 198 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 SHOXO15266 292 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CCL16O15467 120 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 ZNF19P17023 458 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CHATP28329 748 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 UFM1P61960 85 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 FAM199XQ6PEV8 388 aaPredicted RBP9.36□□□□□ -0.91
UFD1-205ENST00000459854 RFPL4BQ6ZWI9 263 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 TRIM46Q7Z4K8 759 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 PXKQ7Z7A4 578 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CADM2Q8N3J6 435 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 DNAJC22Q8N4W6 341 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 YIPF7Q8N8F6 280 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CNIH3Q8TBE1 160 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 KIAA1143Q96AT1 154 aaPredicted RBP9.36□□□□□ -0.91
UFD1-205ENST00000459854 HIST1H2AAQ96QV6 131 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 OR51I1Q9H343 314 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 PRKAB1Q9Y478 270 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 CACNG2Q9Y698 323 aa9.36□□□□□ -0.91
UFD1-205ENST00000459854 TMEM265A0A087WTH1 108 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 C9JVG2 144 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 H3BNC9 293 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 TBL1XO60907 577 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 B3GALNT1O75752 331 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 FARS2O95363 451 aaKnown RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 ADAP00813 363 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 RETP07949 1114 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 ERCC1P07992 297 aaPredicted RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 ITGAMP11215 1152 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 ITPKBP27987 946 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 GABRR2P28476 465 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms