RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 MYRIPQ8NFW9 859 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 TNIP2Q8NFZ5 429 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 OR7G3Q8NG95 312 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 NINJ1Q92982 152 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 UCN3Q969E3 161 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 KRT12Q99456 494 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 SH3GL2Q99962 352 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 CD244Q9BZW8 370 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 PHACTR1Q9C0D0 580 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 ROGDIQ9GZN7 287 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 RPF2Q9H7B2 306 aaKnown RBP17.05■□□□□ 0.32
HDAC11-216ENST00000458642 CNOT11Q9UKZ1 510 aaKnown RBP17.05■□□□□ 0.32
HDAC11-216ENST00000458642 SNX24Q9Y343 169 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 FREM3P0C091 2139 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 NINQ8N4C6 2090 aa17.05■□□□□ 0.32
HDAC11-216ENST00000458642 A0A1W2PS29 197 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 FAM221AA4D161 298 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 CLPSP04118 112 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 COX7A2P14406 83 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 CASP2P42575 452 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 HERVK_113P63132 956 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 ERVK-8P63133 956 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 LAPTM5Q13571 262 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 TBCCQ15814 346 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 HIST2H2ACQ16777 129 aaPredicted RBP17.04■□□□□ 0.32
HDAC11-216ENST00000458642 PAGE2BQ5JRK9 111 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 KHDRBS2Q5VWX1 349 aaKnown RBP17.04■□□□□ 0.32
HDAC11-216ENST00000458642 BICRALQ6AI39 1079 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 HIST2H2AA3Q6FI13 130 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 OR4C11Q6IEV9 310 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 POMZP3Q6PJE2 187 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 SYDE1Q6ZW31 735 aaPredicted RBP17.04■□□□□ 0.32
HDAC11-216ENST00000458642 CDC20BQ86Y33 519 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 LAS2Q8IYD9 372 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 NEIL3Q8TAT5 605 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 SLC22A8Q8TCC7 542 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 FBXL20Q96IG2 436 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 UBXN10Q96LJ8 280 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 GPR22Q99680 433 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 ERVK-6Q9BXR3 956 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 ALG9Q9H6U8 611 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 SLC24A3Q9HC58 644 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 DMRT3Q9NQL9 472 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 CBLCQ9ULV8 474 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 RNF112Q9ULX5 631 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 ERVK-19Q9WJR5 959 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 SPACA6W5XKT8 324 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 NAV3Q8IVL0 2385 aa17.04■□□□□ 0.32
HDAC11-216ENST00000458642 ABCA4P78363 2273 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 GLOD5A6NK44 160 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 UBXN8O00124 270 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 PLPP1O14494 284 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 FAM155BO75949 473 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 C1QAP02745 245 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 FBXO45P0C2W1 286 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 GABRA1P14867 456 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 TNFRSF17Q02223 184 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 ZKSCAN8Q15776 578 aaPredicted RBP17.03■□□□□ 0.32
HDAC11-216ENST00000458642 TMEM35AQ53FP2 167 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 CDKL4Q5MAI5 379 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 MED27Q6P2C8 311 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 LRRC70Q7Z2Q7 622 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 CMC1Q7Z7K0 106 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 MMP21Q8N119 569 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 SRFBP1Q8NEF9 429 aaKnown RBP17.03■□□□□ 0.32
HDAC11-216ENST00000458642 RMND5BQ96G75 393 aaPredicted RBP17.03■□□□□ 0.32
HDAC11-216ENST00000458642 RBBP8Q99708 897 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 WWTR1Q9GZV5 400 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 NSMCE4AQ9NXX6 385 aa17.03■□□□□ 0.32
HDAC11-216ENST00000458642 BOKQ9UMX3 212 aaPredicted RBP17.03■□□□□ 0.32
HDAC11-216ENST00000458642 FLNAP21333 2647 aaKnown RBP17.03■□□□□ 0.32
HDAC11-216ENST00000458642 C15orf38-AP3S2A0A0A6YYH1 394 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 A6NNC1 897 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 EFCAB8A8MWE9 144 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 SYT5O00445 386 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 EEDO75530 441 aaKnown RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 ALOX15P16050 662 aaPredicted RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 STMN1P16949 149 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 TCP1P17987 556 aaKnown RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 GDF1P27539 372 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 ATP6V0D1P61421 351 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 PLIN5Q00G26 463 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 DUSP8Q13202 625 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 ZNF267Q14586 743 aaPredicted RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 EBPQ15125 230 aaKnown RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 ACSF3Q4G176 576 aaPredicted RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 DEPDC1Q5TB30 811 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 CHSY3Q70JA7 882 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 GPR180Q86V85 440 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 CHDHQ8NE62 594 aaPredicted RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 HUS1BQ8NHY5 278 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 TSPAN17Q96FV3 270 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 RBM18Q96H35 190 aaKnown RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 MTERF1Q99551 399 aaKnown RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 DOHHQ9BU89 302 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 ZNF717Q9BY31 904 aaPredicted RBP17.02■□□□□ 0.32
HDAC11-216ENST00000458642 ACKR4Q9NPB9 350 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 DLL4Q9NR61 685 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 B4GALT7Q9UBV7 327 aa17.02■□□□□ 0.32
HDAC11-216ENST00000458642 TCRBV9S1A1TA0A576 114 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms