RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 AGBL4Q5VU57 503 aa11.81□□□□□ -0.52
LINC00959-201ENST00000456581 ERICH5Q6P6B1 374 aa11.81□□□□□ -0.52
LINC00959-201ENST00000456581 SLCO4C1Q6ZQN7 724 aa11.81□□□□□ -0.52
LINC00959-201ENST00000456581 C11orf74Q86VG3 221 aa11.81□□□□□ -0.52
LINC00959-201ENST00000456581 C11orf65Q8NCR3 313 aa11.81□□□□□ -0.52
LINC00959-201ENST00000456581 OTUB1Q96FW1 271 aaPredicted RBP11.81□□□□□ -0.52
LINC00959-201ENST00000456581 MKRN2Q9H000 416 aaKnown RBP11.81□□□□□ -0.52
LINC00959-201ENST00000456581 SLC28A3Q9HAS3 691 aa11.81□□□□□ -0.52
LINC00959-201ENST00000456581 TPST2O60704 377 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 SEMA3DO95025 777 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 ZNF181Q2M3W8 571 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 PNCKQ6P2M8 343 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 LYPD8Q6UX82 237 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 ARMCX6Q7L4S7 300 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 RBM45Q8IUH3 476 aaKnown RBP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 CPA6Q8N4T0 437 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 GPR151Q8TDV0 419 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 C11orf24Q96F05 449 aaPredicted RBP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 FYTTD1Q96QD9 318 aaKnown RBP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 MGLLQ99685 303 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 NUAK2Q9H093 628 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 ABCG4Q9H172 646 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 SP140LQ9H930 580 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 ACER3Q9NUN7 267 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 RUVBL1Q9Y265 456 aaKnown RBP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 PADI2Q9Y2J8 665 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 GPSM3Q9Y4H4 160 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 TRBV4-1A0A0J9YWV2 114 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 LOC110117498-PIK3R3F6TDL0 507 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 RECKO95980 971 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 CSF2P04141 144 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 CXCR2P25025 360 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 MAT2AP31153 395 aaKnown RBP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 RPS19P39019 145 aaKnown RBP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 RFX2P48378 723 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 PRIM2P49643 509 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 VEZF1Q14119 521 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 SLBPQ14493 270 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 CST6Q15828 149 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 MICAQ29983 383 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 TMEM52BQ4KMG9 183 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 ATCAYQ86WG3 371 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 LAX1Q8IWV1 398 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 PGBD3Q8N328 593 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 HDDC3Q8N4P3 179 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 TP53I13Q8NBR0 393 aaPredicted RBP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 OR6F1Q8NGZ6 308 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 TMEM203Q969S6 136 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 TRPV4Q9HBA0 871 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 FZD3Q9NPG1 666 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 DDX28Q9NUL7 540 aaKnown RBP11.8□□□□□ -0.52
LINC00959-201ENST00000456581 FKBP14Q9NWM8 211 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 KCNE2Q9Y6J6 123 aa11.8□□□□□ -0.52
LINC00959-201ENST00000456581 C1QTNF3-AMACRE9PGA6 284 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 DYRK3O43781 588 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 SEMA7AO75326 666 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 ENTPD6O75354 484 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 CLEC2LP0C7M8 214 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 SDHBP21912 280 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 CHMP24386 653 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 PSMB5P28074 263 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 ACADLP28330 430 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 TNFSF8P32971 234 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 PCGF2P35227 344 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 UGT2B10P36537 528 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 HNRNPFP52597 415 aaKnown RBP11.79□□□□□ -0.52
LINC00959-201ENST00000456581 TUBA1BP68363 451 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 CDK3Q00526 305 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 MLLT1Q03111 559 aaPredicted RBP11.79□□□□□ -0.52
LINC00959-201ENST00000456581 DPTQ07507 201 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 LRRC74AQ0VAA2 488 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 GRHL2Q6ISB3 625 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 TUBA1AQ71U36 451 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 IQCF1Q8N6M8 205 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 SNTG1Q9NSN8 517 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 PLEKHM1Q9Y4G2 1056 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 WDR87Q6ZQQ6 2873 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 FFAR1O14842 300 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 BMP8BP34820 402 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 DAB2P98082 770 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 HOXC5Q00444 222 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 SNAP47Q5SQN1 464 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 PTCHD4Q6ZW05 846 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 LACC1Q8IV20 430 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 OR9A1PQ8NGU1 263 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 GANCQ8TET4 914 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 CHAC2Q8WUX2 184 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 FCRL1Q96LA6 429 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 COL21A1Q96P44 957 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 ZCCHC2Q9C0B9 1178 aaKnown RBP11.79□□□□□ -0.52
LINC00959-201ENST00000456581 OR52A5Q9H2C5 316 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 CD93Q9NPY3 652 aa11.79□□□□□ -0.52
LINC00959-201ENST00000456581 ZFR2Q9UPR6 939 aaKnown RBP11.79□□□□□ -0.52
LINC00959-201ENST00000456581 YARS2Q9Y2Z4 477 aaKnown RBP11.79□□□□□ -0.52
LINC00959-201ENST00000456581 H0YIV9 168 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TNFRSF21O75509 655 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 LAMP2P13473 410 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 HNF4AP41235 474 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 LIMK1P53667 647 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms