RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 RNF167Q9H6Y7 350 aa7.42□□□□□ -1.22
RIF1-206ENST00000453091 TRIM36Q9NQ86 728 aa7.42□□□□□ -1.22
RIF1-206ENST00000453091 AKAP7Q9P0M2 348 aaPredicted RBP7.42□□□□□ -1.22
RIF1-206ENST00000453091 ANKRD26Q9UPS8 1709 aa7.42□□□□□ -1.22
RIF1-206ENST00000453091 HTR3EA5X5Y0 456 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 WASH3PC4AMC7 463 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 FUCA1P04066 466 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SMIM18P0DKX4 95 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 LCN1P31025 176 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MAGEA12P43365 314 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 KCNC1P48547 511 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ILF3Q12906 894 aaKnown RBP eCLIP7.41□□□□□ -1.222e-9■■■□□ 17.4
RIF1-206ENST00000453091 RFLNAQ6ZTI6 216 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MICU1Q9BPX6 476 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SIAEQ9HAT2 523 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 PLEKHA1Q9HB21 404 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 RC3H2Q9HBD1 1191 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 AGPAT4Q9NRZ5 378 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MGAT4AQ9UM21 535 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 PDCD5O14737 125 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 FMO6PO60774 539 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SRPRAP08240 638 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 PTX3P26022 381 aaPredicted RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 NR0B1P51843 470 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 NKX3-2P78367 333 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SIM1P81133 766 aaPredicted RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 RGNQ15493 299 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 FBXO43Q4G163 708 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 REEP3Q6NUK4 255 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 PLBD1Q6P4A8 553 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TMEM25Q86YD3 366 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 CYB561A3Q8NBI2 242 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 LMX1AQ8TE12 382 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TSACCQ96A04 125 aaPredicted RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZNF471Q9BX82 626 aaPredicted RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 PIGUQ9H490 435 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SEC61A2Q9H9S3 476 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 OR2S2Q9NQN1 319 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.41□□□□□ -1.22
RIF1-206ENST00000453091 CNOT11Q9UKZ1 510 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 PLCL2Q9UPR0 1127 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 OR1A2Q9Y585 309 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ITGA10O75578 1167 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 PLGP00747 810 aaPredicted RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 APOC3P02656 99 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 RHOP08100 348 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZNF3P17036 446 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TIA1P31483 386 aaKnown RBP eCLIP7.41□□□□□ -1.222e-6■■■□□ 17.7
RIF1-206ENST00000453091 NOVP48745 357 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 NTRK2Q16620 822 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 DCP2Q8IU60 420 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 BEST4Q8NFU0 473 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 UBE2FQ969M7 185 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MAELQ96JY0 434 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 SLC25A18Q9H1K4 315 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 POPDC3Q9HBV1 291 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZDHHC7Q9NXF8 308 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 IGKV6-21A0A0C4DH24 114 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 M0R036 132 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 VNN2O95498 520 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 BMP4P12644 408 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 CD1EP15812 388 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZNF45Q02386 682 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ST3GAL3Q11203 375 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TP53I3Q53FA7 332 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 XKRXQ6PP77 449 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TTLL10Q6ZVT0 673 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MFSD6LQ8IWD5 586 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TUBA1CQ9BQE3 449 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SYNPO2LQ9H987 977 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZNF639Q9UID6 485 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MON2Q7Z3U7 1717 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 A0A1W2PQL4 384 aaPredicted RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 TCRBV3S1A0A5B6 114 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TEX28O15482 410 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 HMGN1P05114 100 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 DHPSP49366 369 aaPredicted RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 PNLIPRP1P54315 467 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 AP3S2P59780 193 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 LRIT3Q3SXY7 679 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ALG1LQ6GMV1 187 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 LARP4Q71RC2 724 aaKnown RBP eCLIP7.41□□□□□ -1.225e-9■■■■□ 24.4
RIF1-206ENST00000453091 CCDC36Q8IYA8 594 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 GPR135Q8IZ08 494 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 HSPA12BQ96MM6 686 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SLC38A3Q99624 504 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 TPSD1Q9BZJ3 242 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 METTL8Q9H825 291 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 PRDM9Q9NQV7 894 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MED11Q9P086 117 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 MRPS33Q9Y291 106 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 CA5BQ9Y2D0 317 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 SMAD6O43541 496 aaKnown RBP7.41□□□□□ -1.22
RIF1-206ENST00000453091 STC2O76061 302 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 GRK5P34947 590 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 PRRT3Q5FWE3 981 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 PNCKQ6P2M8 343 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 ZNF101Q8IZC7 436 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 KLHDC9Q8NEP7 349 aa7.41□□□□□ -1.22
RIF1-206ENST00000453091 OR9A1PQ8NGU1 263 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms