RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 OR2T11Q8NH01 316 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 CD200R1Q8TD46 325 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 NETO1Q8TDF5 533 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 SELENOMQ8WWX9 145 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 WBP1Q96G27 269 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 PITX2Q99697 317 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 MIXL1Q9H2W2 232 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 NCKAP1Q9Y2A7 1128 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 IQCMA0A1B0GVH7 501 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 MFSD2BA6NFX1 497 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 LZTS3O60299 673 aaPredicted RBP12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 STK16O75716 305 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 CBSLP0DN79 551 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 CBSP35520 551 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 ALDH9A1P49189 494 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 RPS24P62847 133 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 CSTF1Q05048 431 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 PUDPQ08623 228 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 CAMK2GQ13555 558 aaPredicted RBP12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 SPANXN4Q5MJ08 99 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 CHST9Q7L1S5 443 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 OVCH2Q7RTZ1 564 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 TINAGL1Q9GZM7 467 aaPredicted RBP12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 CLMPQ9H6B4 373 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 CRLS1Q9UJA2 301 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 FNDC3AQ9Y2H6 1198 aaKnown RBP12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 RAI2Q9Y5P3 530 aa12.85□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF106Q9H2Y7 1883 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 C2orf78A6NCI8 922 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 LGALS8O00214 317 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 LILRB3O75022 631 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 ANXA8P13928 327 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 SMSP52788 366 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 C19orf48Q6RUI8 117 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZSWIM9Q86XI8 627 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 Q8N402 240 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 ZNF655Q8N720 491 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 GKN1Q9NS71 199 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 ACTR10Q9NZ32 417 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 GPRC5BQ9NZH0 403 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 FKBPLQ9UIM3 349 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 MGAT4BQ9UQ53 548 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 YIPF1Q9Y548 306 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 PRAMEF33A0A0G2JMD5 474 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 H7C0S8 307 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 MANBAO00462 879 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 PRAMEF10O60809 474 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 APOL3O95236 402 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 CYP17A1P05093 508 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 PRPS1L1P21108 318 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 INPP1P49441 399 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 RAB33AQ14088 237 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 TEAD4Q15561 434 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 SSX1Q16384 188 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 SPDYE7PQ495Y7 208 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 KLHL22Q53GT1 634 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 SERPINA11Q86U17 422 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 OR8D4Q8NGM9 314 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 HRASLS5Q96KN8 279 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 IKZF5Q9H5V7 419 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 CDCP1Q9H5V8 836 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 FOLH1BQ9HBA9 442 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 KIF25Q9UIL4 384 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 EDARQ9UNE0 448 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 PLCL2Q9UPR0 1127 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 ABCD4O14678 606 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 HCN1O60741 890 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 PSIP1O75475 530 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 ITGB8P26012 769 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 APEX1P27695 318 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 HSD17B2P37059 387 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 CCDC85BQ15834 202 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 STPG2Q8N412 459 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 OR52B6Q8NGF0 335 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 DPYSL5Q9BPU6 564 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 C19orf43Q9BQ61 176 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 NTMT1Q9BV86 223 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 ESRP2Q9H6T0 727 aaKnown RBP12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 RAD18Q9NS91 495 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 TP53BP1Q12888 1972 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 SCN8AQ9UQD0 1980 aa12.84□□□□□ -0.35
SYNGAP1-204ENST00000449372 FAM157BP0CG42 384 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 ACPPP15309 386 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 PRDX3P30048 256 aaKnown RBP12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 CORO1AP31146 461 aaKnown RBP12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 TWF1Q12792 350 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 ADAM15Q13444 863 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 PTPRRQ15256 657 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 ANXA8L1Q5VT79 327 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 TRIM46Q7Z4K8 759 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 TMCO2Q7Z6W1 182 aaPredicted RBP12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 UBTD2Q8WUN7 234 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 KCNC2Q96PR1 638 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 RNF208Q9H0X6 261 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 MLXQ9UH92 298 aa12.83□□□□□ -0.35
SYNGAP1-204ENST00000449372 MMP20O60882 483 aa12.83□□□□□ -0.36
SYNGAP1-204ENST00000449372 HSPA7P48741 367 aa12.83□□□□□ -0.36
SYNGAP1-204ENST00000449372 PTPRCAPQ14761 206 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms