RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 GAS1P54826 345 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 KRR1Q13601 381 aaKnown RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 MFSD4BQ5TF39 518 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 SAXO2Q658L1 398 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 ERAP2Q6P179 960 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 NXPE4Q6UWF7 544 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 CCDC149Q6ZUS6 474 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 GLCCI1Q86VQ1 547 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 CFAP206Q8IYR0 622 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 TM9SF4Q92544 642 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 FGF11Q92914 225 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 PHOX2BQ99453 314 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 ZSCAN5AQ9BUG6 496 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 C11orf54Q9H0W9 315 aaPredicted RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 SIRT3Q9NTG7 399 aaPredicted RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 TXNL4BQ9NX01 149 aaKnown RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 ABT1Q9ULW3 272 aaKnown RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 MAPRE3Q9UPY8 281 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 CKAP5Q14008 2032 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 PLPP1O14494 284 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 TGM5O43548 720 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 MPZL2O60487 215 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 INHAP05111 366 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 TNNI3P19429 210 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 DDOSTP39656 456 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 RORCP51449 518 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 CAV3P56539 151 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 HNRNPA0Q13151 305 aaKnown RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 PIN1Q13526 163 aaPredicted RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 NDUFA5Q16718 116 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 ARMC4Q5T2S8 1044 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 THOC7Q6I9Y2 204 aaKnown RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 C22orf42Q6IC83 251 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 LIPIQ6XZB0 460 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 FAM181AQ8N9Y4 354 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 OR9Q1Q8NGQ5 310 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 CD99L2Q8TCZ2 262 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 SLC5A11Q8WWX8 675 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 AP2M1Q96CW1 435 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 DHRS1Q96LJ7 313 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 ACAT2Q9BWD1 397 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 RMI1Q9H9A7 625 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 RANGRFQ9HD47 186 aaPredicted RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 SEC14L4Q9UDX3 406 aa12.97□□□□□ -0.33
POLR1B-209ENST00000448770 NUFIP1Q9UHK0 495 aaKnown RBP12.97□□□□□ -0.33
POLR1B-209ENST00000448770 TCF20Q9UGU0 1960 aaKnown RBP12.96□□□□□ -0.33
POLR1B-209ENST00000448770 WASHC1A8K0Z3 465 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 ANHXE9PGG2 379 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 M0R3H8 397 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 EPPINO95925 133 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 CSF2P04141 144 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 CYP2A6P11509 494 aaPredicted RBP12.96□□□□□ -0.33
POLR1B-209ENST00000448770 POLR2EP19388 210 aaKnown RBP12.96□□□□□ -0.33
POLR1B-209ENST00000448770 UQCRC2P22695 453 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 DGKGP49619 791 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 POLR2LP62875 67 aaKnown RBP12.96□□□□□ -0.33
POLR1B-209ENST00000448770 ZNF284Q2VY69 593 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 ZFP69Q49AA0 526 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 OR2G6Q5TZ20 316 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 ACSM5Q6NUN0 579 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 WASH2PQ6VEQ5 465 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 RAB43Q86YS6 212 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 ZNF547Q8IVP9 402 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 OR52I1Q8NGK6 324 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 SETD6Q8TBK2 473 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 TCEAL4Q96EI5 215 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 SNX18Q96RF0 628 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 DCLRE1CQ96SD1 692 aaKnown RBP12.96□□□□□ -0.33
POLR1B-209ENST00000448770 EFCAB11Q9BUY7 163 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 SPG21Q9NZD8 308 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 GRIP1Q9Y3R0 1128 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 CMAHPQ9Y471 501 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 HCFC2Q9Y5Z7 792 aa12.96□□□□□ -0.33
POLR1B-209ENST00000448770 LRRK1Q38SD2 2015 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 NUP210Q8TEM1 1887 aaPredicted RBP12.96□□□□□ -0.34
POLR1B-209ENST00000448770 TRAV19A0A0A6YYK7 116 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 IQCMA0A1B0GVH7 501 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 HMGN4O00479 90 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 PITPNM1O00562 1244 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 PLA2G10O15496 165 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 SCO2O43819 266 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 KRT75O95678 551 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 IFNA14P01570 189 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 PSMA1P25786 263 aaKnown RBP12.96□□□□□ -0.34
POLR1B-209ENST00000448770 MMP12P39900 470 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 RPS25P62851 125 aaKnown RBP12.96□□□□□ -0.34
POLR1B-209ENST00000448770 HSPB3Q12988 150 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 NCF4Q15080 339 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 NANOGNBQ7Z5D8 188 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 SLC9B2Q86UD5 537 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 AMER3Q8N944 861 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 CREB3L4Q8TEY5 395 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 SLC25A46Q96AG3 418 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 NEURL3Q96EH8 262 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 MND1Q9BWT6 205 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 NDEL1Q9GZM8 345 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 MIEF1Q9NQG6 463 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 CTPS2Q9NRF8 586 aa12.96□□□□□ -0.34
POLR1B-209ENST00000448770 A4GNTQ9UNA3 340 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms