RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 OR5D16Q8NGK9 328 aa16.5■□□□□ 0.23
SMC6-206ENST00000446852 SLC37A2Q8TED4 501 aa16.5■□□□□ 0.23
SMC6-206ENST00000446852 TM4SF19Q96DZ7 209 aa16.5■□□□□ 0.23
SMC6-206ENST00000446852 GSDMCQ9BYG8 508 aa16.5■□□□□ 0.23
SMC6-206ENST00000446852 LMAN1LQ9HAT1 526 aa16.5■□□□□ 0.23
SMC6-206ENST00000446852 KRT84Q9NSB2 600 aa16.5■□□□□ 0.23
SMC6-206ENST00000446852 ZCCHC3Q9NUD5 404 aaKnown RBP16.5■□□□□ 0.23
SMC6-206ENST00000446852 LAMA1P25391 3075 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 A0A0J9YVX5 310 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 CHURC1-FNTBB4DL54 471 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 C5orf58C9J3I9 102 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 ADAMDEC1O15204 470 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 AGXTP21549 392 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 FUT4P22083 530 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 RXRGP48443 463 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 LSSP48449 732 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 RGS1Q08116 209 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 COL9A2Q14055 689 aaPredicted RBP16.49■□□□□ 0.23
SMC6-206ENST00000446852 LRIT3Q3SXY7 679 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 CCDC116Q8IYX3 515 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 OR4C15Q8NGM1 316 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 UTP15Q8TED0 518 aaKnown RBP16.49■□□□□ 0.23
SMC6-206ENST00000446852 MAGED4Q96JG8 741 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 SLC35G5Q96KT7 338 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 ZNF347Q96SE7 839 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 OR51I1Q9H343 314 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 POT1Q9NUX5 634 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 DDX18Q9NVP1 670 aaKnown RBP16.49■□□□□ 0.23
SMC6-206ENST00000446852 PILRAQ9UKJ1 303 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 COMMD3-BMI1R4GMX3 469 aa16.49■□□□□ 0.23
SMC6-206ENST00000446852 A0A1W2PPC4 97 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 TNFRSF11BO00300 401 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 SLC35G6P0C7Q6 338 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 OR12D1P0DN82 309 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 CD247P20963 164 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 FEN1P39748 380 aaKnown RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 XCR1P46094 333 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 IL18R1Q13478 541 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 PUM1Q14671 1186 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMC6-206ENST00000446852 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 RBM48Q5RL73 367 aaKnown RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 FIGLAQ6QHK4 219 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 TSTD1Q8NFU3 115 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 OR52J3Q8NH60 311 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 FBLIM1Q8WUP2 373 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 APOBEC4Q8WW27 367 aaKnown RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 SLC6A18Q96N87 628 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 GAS2L1Q99501 681 aaPredicted RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 KIF1CO43896 1103 aaKnown RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 PVRP15151 417 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 RYKP34925 604 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 CDH12P55289 794 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 SPIBQ01892 262 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 C1orf61Q13536 156 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 SMAD2Q15796 467 aaKnown RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 SYPL1Q16563 259 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 FRMPD2BQ6IN97 320 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 ZNF773Q6PK81 442 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 TAF8Q7Z7C8 310 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 ZNF761Q86XN6 746 aaPredicted RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 TTC29Q8NA56 475 aaPredicted RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 GPR32P1Q8NGA4 272 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 ZCCHC10Q8TBK6 192 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 ZFPM2Q8WW38 1151 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 KLHL6Q8WZ60 621 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 OTUB1Q96FW1 271 aaPredicted RBP16.48■□□□□ 0.23
SMC6-206ENST00000446852 ZSCAN32Q9NX65 697 aa16.48■□□□□ 0.23
SMC6-206ENST00000446852 TMEM265A0A087WTH1 108 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 LOC105369274A0A096LPK9 316 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 LOC102723532A0A0G2JNH3 316 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 AHCYL1O43865 530 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 UGT2B11O75310 529 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 DNAJB5O75953 348 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 MFN2O95140 757 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 EEF1B2P24534 225 aaKnown RBP16.47■□□□□ 0.23
SMC6-206ENST00000446852 TGM3Q08188 693 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 PMS2P3Q13401 168 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 KEAP1Q14145 624 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 KCTD8Q6ZWB6 473 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 OR4N4Q8N0Y3 316 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 CNIH3Q8TBE1 160 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 POLR1BQ9H9Y6 1135 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 PAPOLBQ9NRJ5 636 aaKnown RBP16.47■□□□□ 0.23
SMC6-206ENST00000446852 LYARQ9NX58 379 aaKnown RBP16.47■□□□□ 0.23
SMC6-206ENST00000446852 ENTPD4Q9Y227 616 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 IGHV1OR15-9A0A0B4J2B8 117 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 ITGA2P17301 1181 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 PPP1CAP62136 330 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 FZD5Q13467 585 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 TMEM107Q6UX40 140 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 TMEM64Q6YI46 380 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 ZNF605Q86T29 641 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 GIPC3Q8TF64 312 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 ZNF681Q96N22 645 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 TREX2Q9BQ50 279 aaPredicted RBP16.47■□□□□ 0.23
SMC6-206ENST00000446852 RLIMQ9NVW2 624 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 ENPP4Q9Y6X5 453 aa16.47■□□□□ 0.23
SMC6-206ENST00000446852 KIR2DS5A0A0G2JLQ3 304 aa16.46■□□□□ 0.23
SMC6-206ENST00000446852 A0A0G2JNG1 304 aa16.46■□□□□ 0.23
SMC6-206ENST00000446852 KIR2DS3K7RE56 304 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms