RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 ALG14Q96F25 216 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 ZBED6CLQ96FA7 236 aaPredicted RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 TM9SF2Q99805 663 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 SPATA9Q9BWV2 254 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 XKR8Q9H6D3 395 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 ACER3Q9NUN7 267 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 MKL2Q9ULH7 1088 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 H0YIV9 168 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 TGM5O43548 720 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 PRKAR1AP10644 381 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 OSMP13725 252 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 CELP19835 753 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 CXCR2P25025 360 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 ANXA11P50995 505 aaKnown RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 PNLIPRP1P54315 467 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 EIF4HQ15056 248 aaKnown RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 SLCO4C1Q6ZQN7 724 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 OR2A12Q8NGT7 310 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 UFD1Q92890 307 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 EFHD2Q96C19 240 aaPredicted RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 WACQ9BTA9 647 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 PRR14Q9BWN1 585 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 FBXO9Q9UK97 447 aaPredicted RBP11.31□□□□□ -0.6
MSH6-204ENST00000445503 MGAT4BQ9UQ53 548 aa11.31□□□□□ -0.6
MSH6-204ENST00000445503 MYO16Q9Y6X6 1858 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 TDRD15B5MCY1 1934 aaKnown RBP11.3□□□□□ -0.6
MSH6-204ENST00000445503 OTOFQ9HC10 1997 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 TRBV23OR9-2A0A075B6M9 112 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 CPSF4LA6NMK7 179 aaKnown RBP11.3□□□□□ -0.6
MSH6-204ENST00000445503 RB1P06400 928 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 SDC2P34741 201 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 SNRPD2P62316 118 aaKnown RBP11.3□□□□□ -0.6
MSH6-204ENST00000445503 NTHL1P78549 312 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 RAB33AQ14088 237 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 ATAD3CQ5T2N8 411 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 FAM20CQ8IXL6 584 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 OR8J1Q8NGP2 316 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 OR5AR1Q8NGP9 310 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 WDR20Q8TBZ3 569 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 COQ8BQ96D53 544 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 TCEAL4Q96EI5 215 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 FRMD6Q96NE9 622 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 NECTIN4Q96NY8 510 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 NELL2Q99435 816 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 PSD2Q9BQI7 771 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 BRF2Q9HAW0 419 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 TDP1Q9NUW8 608 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 SPATA6Q9NWH7 488 aaPredicted RBP11.3□□□□□ -0.6
MSH6-204ENST00000445503 NAALAD2Q9Y3Q0 740 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 TNS1Q9HBL0 1735 aaKnown RBP11.3□□□□□ -0.6
MSH6-204ENST00000445503 UGDHO60701 494 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 TIMP2P16035 220 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 ZNF91Q05481 1191 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 MMAAQ8IVH4 418 aaKnown RBP11.3□□□□□ -0.6
MSH6-204ENST00000445503 OR4K5Q8NGD3 323 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 CHTF18Q8WVB6 975 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 NUS1Q96E22 293 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 TXNDC15Q96J42 360 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 PITX2Q99697 317 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 CXorf36Q9H7Y0 433 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 ZNF222Q9UK12 451 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 LOC285556D6RIA3 1793 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 IFNGR2P38484 337 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 SYPL1Q16563 259 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 ZSWIM7Q19AV6 140 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 CCDC116Q8IYX3 515 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.3□□□□□ -0.63e-7■■■■□ 20.1
MSH6-204ENST00000445503 SERHL2Q9H4I8 314 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 QPCTLQ9NXS2 382 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 CCDC59Q9P031 241 aaKnown RBP11.3□□□□□ -0.6
MSH6-204ENST00000445503 STUB1Q9UNE7 303 aa11.3□□□□□ -0.6
MSH6-204ENST00000445503 CNTRLQ7Z7A1 2325 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 MEIOCA2RUB1 952 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 LATO43561 262 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 LATS1O95835 1130 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 FURINP09958 794 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 IL7P13232 177 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 LAG3P18627 525 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
MSH6-204ENST00000445503 CLCNKAP51800 687 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 RAB8AP61006 207 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 HOXC5Q00444 222 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 CSTF1Q05048 431 aaKnown RBP11.29□□□□□ -0.6
MSH6-204ENST00000445503 WSCD2Q2TBF2 565 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 ZNF805Q5CZA5 627 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 IDNKQ5T6J7 187 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 PLEKHM3Q6ZWE6 761 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 MTSS1LQ765P7 747 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 AMZ2Q86W34 360 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 LACC1Q8IV20 430 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 SLC38A5Q8WUX1 472 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 FAIM2Q9BWQ8 316 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 GABARAPL3Q9BY60 117 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 ABCG4Q9H172 646 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 P2RX2Q9UBL9 471 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 YARS2Q9Y2Z4 477 aaKnown RBP11.29□□□□□ -0.6
MSH6-204ENST00000445503 MRPS23Q9Y3D9 190 aaKnown RBP11.29□□□□□ -0.6
MSH6-204ENST00000445503 N6AMT1Q9Y5N5 214 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 TSC2P49815 1807 aa11.29□□□□□ -0.6
MSH6-204ENST00000445503 SH3D21A4FU49 640 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms