RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ANXA4P09525 319 aaPredicted RBP11.02□□□□□ -0.65
HSPG2-206ENST00000439717 BGNP21810 368 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 CASRP41180 1078 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 SLC1A6P48664 564 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 WDR4P57081 412 aaKnown RBP11.02□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF763Q0D2J5 394 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 STX3Q13277 289 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 KIAA0040Q15053 153 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 SPRED3Q2MJR0 410 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 NADK2Q4G0N4 442 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 ACER2Q5QJU3 275 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 B3GNTL1Q67FW5 361 aaPredicted RBP11.02□□□□□ -0.65
HSPG2-206ENST00000439717 SLC6A19Q695T7 634 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 NOXRED1Q6NXP6 359 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 ATG14Q6ZNE5 492 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 Q6ZSR9 355 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 RPS19BP1Q86WX3 136 aaKnown RBP11.02□□□□□ -0.65
HSPG2-206ENST00000439717 CRLF3Q8IUI8 442 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 TRIM42Q8IWZ5 723 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 DDIASQ8IXT1 998 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 KIF2BQ8N4N8 673 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 AMER2Q8N7J2 671 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 OR1N1Q8NGS0 311 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 OR8K3Q8NH51 312 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 RAB3IL1Q8TBN0 382 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 SLC2A12Q8TD20 617 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 C16orf78Q8WTQ4 265 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 NCLNQ969V3 563 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 ART5Q96L15 291 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 DEFB126Q9BYW3 111 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 ILKAPQ9H0C8 392 aaPredicted RBP11.02□□□□□ -0.65
HSPG2-206ENST00000439717 LRTM1Q9HBL6 345 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 C1orf109Q9NX04 203 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 COPS7AQ9UBW8 275 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 DLGAP4Q9Y2H0 992 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 TMED5Q9Y3A6 229 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 RAP2CQ9Y3L5 183 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 ATRXP46100 2492 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 SCN2AQ99250 2005 aa11.02□□□□□ -0.65
HSPG2-206ENST00000439717 TRBV11-1A0A0K0K1C0 115 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 MYOCOSA0A1B0GUC4 107 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 WASHC1A8K0Z3 465 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 HMGB1P1B2RPK0 211 aaPredicted RBP11.01□□□□□ -0.65
HSPG2-206ENST00000439717 PIP5K1BO14986 540 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 LSM1O15116 133 aaKnown RBP11.01□□□□□ -0.65
HSPG2-206ENST00000439717 ITM2AO43736 263 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 ZFAND5O76080 213 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 DDAH2O95865 285 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 IL3P08700 152 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 LINC00032P0C843 101 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 PORP16435 677 aaPredicted RBP11.01□□□□□ -0.65
HSPG2-206ENST00000439717 CSNK2A2P19784 350 aaPredicted RBP11.01□□□□□ -0.65
HSPG2-206ENST00000439717 CD97P48960 835 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 XKP51811 444 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 ARG2P78540 354 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 TLR1Q15399 786 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 NR6A1Q15406 480 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 CES4AQ5XG92 561 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 HSDL2Q6YN16 418 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 IKBIPQ70UQ0 350 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF605Q86T29 641 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 SAMD14Q8IZD0 417 aaPredicted RBP11.01□□□□□ -0.65
HSPG2-206ENST00000439717 OR2T11Q8NH01 316 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 AGR3Q8TD06 166 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 MGARPQ8TDB4 240 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 RIT1Q92963 219 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 UCN3Q969E3 161 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 PPWD1Q96BP3 646 aaKnown RBP11.01□□□□□ -0.65
HSPG2-206ENST00000439717 FBXL20Q96IG2 436 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 FCRL1Q96LA6 429 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 PPP3R2Q96LZ3 170 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 EBPLQ9BY08 206 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 MFRPQ9BY79 579 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 OR8D2Q9GZM6 311 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 CDCP1Q9H5V8 836 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.01□□□□□ -0.65
HSPG2-206ENST00000439717 EHD3Q9NZN3 535 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 HAO1Q9UJM8 370 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 PTGDR2Q9Y5Y4 395 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF780BQ9Y6R6 833 aa11.01□□□□□ -0.65
HSPG2-206ENST00000439717 TNRC6AQ8NDV7 1962 aaKnown RBP11.01□□□□□ -0.65
HSPG2-206ENST00000439717 DOCK10Q96BY6 2186 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 TLN1Q9Y490 2541 aaKnown RBP11□□□□□ -0.65
HSPG2-206ENST00000439717 OR5H15A6NDH6 313 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 FCHO1O14526 889 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 LYPLA1O75608 230 aaPredicted RBP11□□□□□ -0.65
HSPG2-206ENST00000439717 SORBS2O94875 1100 aaKnown RBP11□□□□□ -0.65
HSPG2-206ENST00000439717 WDPCPO95876 746 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 IGKV3-11P04433 115 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 ATP1B1P05026 303 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 CPMP14384 443 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 DDCP20711 480 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 ALDH9A1P49189 494 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 TNFSF10P50591 281 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 MLF1P58340 268 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 BST1Q10588 318 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 ZNF169Q14929 603 aaPredicted RBP11□□□□□ -0.65
HSPG2-206ENST00000439717 PLEKHN1Q494U1 663 aaPredicted RBP11□□□□□ -0.65
HSPG2-206ENST00000439717 XKR7Q5GH72 579 aa11□□□□□ -0.65
HSPG2-206ENST00000439717 ATG16L1Q676U5 607 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms