RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CCND1P24385 295 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 HPDP32754 393 aaPredicted RBP13.02□□□□□ -0.33
LINC01088-201ENST00000437737 CRHR1P34998 444 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 SOX3P41225 446 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 HNF4AP41235 474 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 CCR8P51685 355 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 TAS2R39P59534 338 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 RAB8AP61006 207 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 SLC10A1Q14973 349 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 TERF2Q15554 542 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 FAM83EQ2M2I3 478 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 TSNAXIP1Q2TAA8 658 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 ZNF750Q32MQ0 723 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 KLC3Q6P597 504 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 MBOAT1Q6ZNC8 495 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 FAM47EQ6ZV65 393 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 KRTAP1-3Q8IUG1 177 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 NKAPQ8N5F7 415 aaKnown RBP13.02□□□□□ -0.33
LINC01088-201ENST00000437737 BANPQ8N9N5 519 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 UTP15Q8TED0 518 aaKnown RBP13.02□□□□□ -0.33
LINC01088-201ENST00000437737 SREK1Q8WXA9 508 aaKnown RBP13.02□□□□□ -0.33
LINC01088-201ENST00000437737 APOPT1Q96IL0 206 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 NDNQ99608 321 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 GPR21Q99679 349 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 VPS11Q9H270 941 aa13.02□□□□□ -0.33
LINC01088-201ENST00000437737 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
LINC01088-201ENST00000437737 TRMT6Q9UJA5 497 aaKnown RBP13.02□□□□□ -0.33
LINC01088-201ENST00000437737 TRGV5A0A0B4J1U4 118 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 TRBC2A0A5B9 178 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 URADA6NGE7 173 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 WWP2O00308 870 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 DNASE1L1P49184 302 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 XKR6Q5GH73 641 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 RBM20Q5T481 1227 aaKnown RBP13.01□□□□□ -0.33
LINC01088-201ENST00000437737 LRRC8EQ6NSJ5 796 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 ZNF549Q6P9A3 640 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 RTL4Q6ZR62 310 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 SH2D5Q6ZV89 423 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 CA13Q8N1Q1 262 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 NT5CQ8TCD5 201 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 RASL10BQ96S79 203 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 HAUS8Q9BT25 410 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 PLEKHF2Q9H8W4 249 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 CAB39LQ9H9S4 337 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 CLK4Q9HAZ1 481 aaKnown RBP13.01□□□□□ -0.33
LINC01088-201ENST00000437737 MYOTQ9UBF9 498 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 FOXD3Q9UJU5 478 aaPredicted RBP13.01□□□□□ -0.33
LINC01088-201ENST00000437737 ADAMTS6Q9UKP5 1117 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 PDE10AQ9Y233 779 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 MED16Q9Y2X0 877 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 DHRS7Q9Y394 339 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 MMACHCQ9Y4U1 282 aa13.01□□□□□ -0.33
LINC01088-201ENST00000437737 GOLGA8RI6L899 631 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 EIF3FO00303 357 aaPredicted RBP13□□□□□ -0.33
LINC01088-201ENST00000437737 ARHGEF9O43307 516 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 HCN1O60741 890 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 P04436 131 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 EPXP11678 715 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 NPPBP16860 134 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 PPP2R1BP30154 601 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 RGS4P49798 205 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 CDKN2DP55273 166 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 IL2P60568 153 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 PPP2R2BQ00005 443 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 PHKG1Q16816 387 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 CCDC153Q494R4 210 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 C4orf33Q8N1A6 199 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 VWA5B2Q8N398 1253 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 ABHD11Q8NFV4 315 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 CD200R1Q8TD46 325 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 SCYL1Q96KG9 808 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 YIPF4Q9BSR8 244 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 SGPP1Q9BX95 441 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 NMRAL1Q9HBL8 299 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 SACM1LQ9NTJ5 587 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 TUBA8Q9NY65 449 aaPredicted RBP13□□□□□ -0.33
LINC01088-201ENST00000437737 SPRR3Q9UBC9 169 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 ZFP69BQ9UJL9 534 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 MID2Q9UJV3 735 aa13□□□□□ -0.33
LINC01088-201ENST00000437737 PPIEQ9UNP9 301 aaKnown RBP13□□□□□ -0.33
LINC01088-201ENST00000437737 TMEM120BA0PK00 339 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 PABPN1LA6NDY0 278 aaKnown RBP12.99□□□□□ -0.33
LINC01088-201ENST00000437737 CLCA1A8K7I4 914 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 PHGDHO43175 533 aaKnown RBP12.99□□□□□ -0.33
LINC01088-201ENST00000437737 TYROBPO43914 113 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 KLHL2O95198 593 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 C8GP07360 202 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 RBP1P09455 135 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 LTA4HP09960 611 aaKnown RBP12.99□□□□□ -0.33
LINC01088-201ENST00000437737 HIST1H2AGP0C0S8 130 aaPredicted RBP12.99□□□□□ -0.33
LINC01088-201ENST00000437737 SLC35E2BP0CK96 405 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 CD53P19397 219 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 HIST1H2ADP20671 130 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 ENDOUP21128 410 aaKnown RBP12.99□□□□□ -0.33
LINC01088-201ENST00000437737 GPR143P51810 404 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 ATP6V0D1P61421 351 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 SLC13A2Q13183 592 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 ACAP2Q15057 778 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 POU4F3Q15319 338 aa12.99□□□□□ -0.33
LINC01088-201ENST00000437737 HYAL4Q2M3T9 481 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms