RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CBLP22681 906 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 POU1F1P28069 291 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 EIF2DP41214 584 aaKnown RBP9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 SUZ12Q15022 739 aaKnown RBP9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 ARHGAP15Q53QZ3 475 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 CCBE1Q6UXH8 406 aaPredicted RBP9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 CEACAM20Q6UY09 585 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 NRSN1Q8IZ57 195 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 PIK3R3Q92569 461 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 Q96MT0 163 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 F2RL3Q96RI0 385 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 CDADC1Q9BWV3 514 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 SP140LQ9H930 580 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 MIEF1Q9NQG6 463 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 DUSP12Q9UNI6 340 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 TRANK1O15050 2925 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 EYSQ5T1H1 3165 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 METTL15A6NJ78 407 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 PPM1DO15297 605 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 CHMP24386 653 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 PTGER1P34995 402 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 GRK3P35626 688 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 ALDH9A1P49189 494 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 POU6F2P78424 691 aaPredicted RBP9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 RBBP4Q09028 425 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 ZNF404Q494X3 552 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 ARMCX4Q5H9R4 360 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 PRAMEF14Q5SWL7 426 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 C10orf62Q5T681 223 aaPredicted RBP9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 C9orf64Q5T6V5 341 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 PRAMEF13Q5VWM6 474 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 MLIPQ5VWP3 458 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 SLC9B2Q86UD5 537 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 FAM129CQ86XR2 697 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 STX19Q8N4C7 294 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 KIAA1958Q8N8K9 716 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 AMER3Q8N944 861 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 GPR32P1Q8NGA4 272 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 SLC38A5Q8WUX1 472 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 GEMIN6Q8WXD5 167 aaKnown RBP9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 JPH3Q8WXH2 748 aaPredicted RBP9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 CHCHD6Q9BRQ6 235 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 OR52A5Q9H2C5 316 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 EPHX3Q9H6B9 360 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 NMNAT1Q9HAN9 279 aaPredicted RBP9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 TAC3Q9UHF0 121 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 ENPP4Q9Y6X5 453 aa9.9□□□□□ -0.82
CLSTN1-203ENST00000435891 A0A0G2JN53 185 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 ARHGEF9O43307 516 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 MTRF1O75570 445 aaKnown RBP9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 SOX14O95416 240 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 TIMP1P01033 207 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 BCHEP06276 602 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 CNR2P34972 360 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 DSTNP60981 165 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 SEC23BQ15437 767 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 CDONQ4KMG0 1287 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 HIST2H2AA3Q6FI13 130 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 LINC00299Q6ZSB3 139 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 HMGN2P46Q86SG4 172 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 CDH24Q86UP0 819 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 FAM83FQ8NEG4 500 aaPredicted RBP9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 APOBEC4Q8WW27 367 aaKnown RBP9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 MYDGFQ969H8 173 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 IL4I1Q96RQ9 567 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 IMPAD1Q9NX62 359 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 MAPRE3Q9UPY8 281 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 HCN4Q9Y3Q4 1203 aa9.9□□□□□ -0.83
CLSTN1-203ENST00000435891 SPTBN5Q9NRC6 3674 aaKnown RBP9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 LZTS3O60299 673 aaPredicted RBP9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 ADH5P11766 374 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 GLULP15104 373 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 OR2B6P58173 313 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 COL9A2Q14055 689 aaPredicted RBP9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 ZNF630Q2M218 657 aaPredicted RBP9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 UAP1L1Q3KQV9 507 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 ZNF770Q6IQ21 691 aaPredicted RBP9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 OR4D11Q8NGI4 311 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 POF1BQ8WVV4 589 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 LRIG1Q96JA1 1093 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 DHRS9Q9BPW9 319 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 LGR4Q9BXB1 951 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 FTSJ1Q9UET6 329 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 POLHQ9Y253 713 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 FAM25AB3EWG3 89 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 FAM25CB3EWG5 89 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 FAM25GB3EWG6 89 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 ZW10O43264 779 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 DDX6P26196 483 aaKnown RBP eCLIP9.89□□□□□ -0.832e-6■■□□□ 14.2
CLSTN1-203ENST00000435891 RGS6P49758 472 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 HMGA2P52926 109 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 PPP5CP53041 499 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 LIMK1P53667 647 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 DEFA1P59665 94 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 DEFA3P59666 94 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 CSNK2BP67870 215 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 CHRNEQ04844 493 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 LRRC74AQ0VAA2 488 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 HSPB3Q12988 150 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 BCDIN3DQ7Z5W3 292 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms