RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZDHHC2Q9UIJ5 367 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 FIS1Q9Y3D6 152 aa15.82■□□□□ 0.12
UBE3D-204ENST00000430071 PKDREJQ9NTG1 2253 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 GABRR3A8MPY1 467 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 LRRTM2O43300 516 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 SLC1A6P48664 564 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 AP2B1P63010 937 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 MEP1AQ16819 746 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 UGT3A2Q3SY77 523 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 HSP90B2PQ58FF3 399 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF766Q5HY98 468 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 CLNKQ7Z7G1 428 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF227Q86WZ6 799 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 SCUBE1Q8IWY4 988 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 FAR2Q96K12 515 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 C5orf34Q96MH7 638 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 KCNC2Q96PR1 638 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 SERPINI1Q99574 410 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF717Q9BY31 904 aaPredicted RBP15.81■□□□□ 0.12
UBE3D-204ENST00000430071 MRPL1Q9BYD6 325 aaKnown RBP15.81■□□□□ 0.12
UBE3D-204ENST00000430071 ACPTQ9BZG2 426 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 BRF2Q9HAW0 419 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF223Q9UK11 482 aaPredicted RBP15.81■□□□□ 0.12
UBE3D-204ENST00000430071 SLC12A4Q9UP95 1085 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 TRAF6Q9Y4K3 522 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 PTGDR2Q9Y5Y4 395 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 NCKAP5O14513 1909 aa15.81■□□□□ 0.12
UBE3D-204ENST00000430071 SERTM1A2A2V5 107 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 SAGE2PA6NJ88 616 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 PSMD12O00232 456 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 ZNHIT1O43257 154 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 PRKNO60260 465 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 SNNO75324 88 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 RASAL1O95294 804 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 ATP5A1P25705 553 aaKnown RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 RAP1GDS1P52306 607 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 RAB38P57729 211 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 SKP1P63208 163 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 HMGCS1Q01581 520 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 TGM3Q08188 693 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 CSTF3Q12996 717 aaKnown RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 OR1C1Q15619 314 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 NIPAL1Q6NVV3 410 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF781Q8N8C0 355 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 SRFBP1Q8NEF9 429 aaKnown RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 RAB3IL1Q8TBN0 382 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 THAP3Q8WTV1 239 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 ZNF75CPQ92670 426 aaPredicted RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 RGMAQ96B86 450 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 TBCDQ9BTW9 1192 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 TUBB1Q9H4B7 451 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 MANSC1Q9H8J5 431 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 CLK4Q9HAZ1 481 aaKnown RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 PNO1Q9NRX1 252 aaKnown RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 INTS9Q9NV88 658 aaKnown RBP15.8■□□□□ 0.12
UBE3D-204ENST00000430071 TEKT2Q9UIF3 430 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 DNAJC15Q9Y5T4 150 aa15.8■□□□□ 0.12
UBE3D-204ENST00000430071 CYR61O00622 381 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 EEDO75530 441 aaKnown RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 NEURL1O76050 574 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 SEMA3DO95025 777 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 SCELO95171 688 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 DDAH2O95865 285 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 HSD3B1P14060 373 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 HIST1H1TP22492 207 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 HSD3B2P26439 372 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 TPP2P29144 1249 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 BSGP35613 385 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 SSR2P43308 183 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 MTTPP55157 894 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 LIM2P55344 173 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 TBL3Q12788 808 aaKnown RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 C4orf17Q53FE4 359 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 C1QL3Q5VWW1 255 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 OR4C11Q6IEV9 310 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 C16orf47Q6ZP98 133 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 TRIM46Q7Z4K8 759 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 FJX1Q86VR8 437 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 RPS19BP1Q86WX3 136 aaKnown RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 TRIM42Q8IWZ5 723 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 CLYBLQ8N0X4 340 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 GBP7Q8N8V2 638 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 ACOT4Q8N9L9 421 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 APCDD1LQ8NCL9 501 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 SERINC2Q96SA4 455 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 MAPKAP1Q9BPZ7 522 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 CENPKQ9BS16 269 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 TSPAN10Q9H1Z9 355 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 COPS7BQ9H9Q2 264 aaPredicted RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 LIN28AQ9H9Z2 209 aaKnown RBP15.79■□□□□ 0.12
UBE3D-204ENST00000430071 PRTFDC1Q9NRG1 225 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 KCMF1Q9P0J7 381 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 VPS29Q9UBQ0 182 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 HAO1Q9UJM8 370 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 RAP2CQ9Y3L5 183 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 CCL27Q9Y4X3 112 aa15.79■□□□□ 0.12
UBE3D-204ENST00000430071 B3GALT2O43825 422 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 MYO1DO94832 1006 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 STSP08842 583 aa15.78■□□□□ 0.12
UBE3D-204ENST00000430071 GPR143P51810 404 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms