RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 WBP2Q969T9 261 aa12.06□□□□□ -0.48
CPNE4-201ENST00000429747 TMEM121BQ9BXQ6 578 aaPredicted RBP12.06□□□□□ -0.48
CPNE4-201ENST00000429747 CHIAQ9BZP6 476 aa12.06□□□□□ -0.48
CPNE4-201ENST00000429747 PCBD2Q9H0N5 130 aa12.06□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF224Q9NZL3 707 aa12.06□□□□□ -0.48
CPNE4-201ENST00000429747 IFNGP01579 166 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 GPX2P18283 190 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 CASP3P42574 277 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 MGAT3Q09327 533 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 CTF1Q16619 201 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF805Q5CZA5 627 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 COX20Q5RI15 118 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 MEDAGQ5VYS4 303 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 FAM124AQ86V42 546 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TIGD4Q8IY51 512 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 CASD1Q96PB1 797 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 CLSTN3Q9BQT9 956 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TTTY10Q9BZA0 68 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 OR51I1Q9H343 314 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 MRPS30Q9NP92 439 aaKnown RBP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 RNF186Q9NXI6 227 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 ZFR2Q9UPR6 939 aaKnown RBP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 OR10H1Q9Y4A9 318 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 SDK1Q7Z5N4 2213 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 METTL15A6NJ78 407 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 RNASET2O00584 256 aaKnown RBP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 ARHGAP33O14559 1287 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 NDUFS4O43181 175 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 HMGN1P05114 100 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 ACSL1P33121 698 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 RCVRNP35243 200 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 EIF2DP41214 584 aaKnown RBP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 SLC9A3P48764 834 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 ST3GAL3Q11203 375 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 DCUN1D3Q8IWE4 304 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 OR4C6Q8NH72 309 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 NARS2Q96I59 477 aaKnown RBP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 SECISBP2Q96T21 854 aaKnown RBP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TMEM27Q9HBJ8 222 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 EXTL2Q9UBQ6 330 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3DA0A087WVF3 549 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3IA0A087WXS9 549 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3EA0A087X179 549 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3KA0A087X1G2 549 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3FA6NER0 549 aaPredicted RBP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 CD8B2A6NJW9 211 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 A6NL46 340 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3LB9A6J9 549 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 UGDHO60701 494 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3HP0C7X1 549 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 CD8BP10966 210 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 IL7P13232 177 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 CHMP24386 653 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 MASP1P48740 699 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 ADAM15Q13444 863 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 SF3B4Q15427 424 aaKnown RBP eCLIP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 ZNHIT3Q15649 155 aaPredicted RBP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 LRIF1Q5T3J3 769 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3GQ6DHY5 549 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3CQ6IPX1 549 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 TBC1D3Q8IZP1 549 aaPredicted RBP12.05□□□□□ -0.48
CPNE4-201ENST00000429747 OR8J2Q8NGG1 315 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 DYNC2LI1Q8TCX1 351 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 ZDHHC4Q9NPG8 344 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 RLIMQ9NVW2 624 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 KCNK6Q9Y257 313 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 SLC27A6Q9Y2P4 619 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 PCDHGA6Q9Y5G7 932 aa12.05□□□□□ -0.48
CPNE4-201ENST00000429747 LRRC72A6NJI9 287 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 WWP2O00308 870 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF821O75541 412 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 NUDT14O95848 222 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 RLN1P04808 185 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 GNG2P59768 71 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 LRRC32Q14392 662 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 IHHQ14623 411 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ADNP2Q6IQ32 1131 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 LRRTM4Q86VH4 590 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 RANBP3LQ86VV4 465 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 LILRA3Q8N6C8 439 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 NATD1Q8N6N6 113 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 PJA1Q8NG27 643 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ECHDC3Q96DC8 303 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 C1QTNF7Q9BXJ2 289 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 NDUFAF4Q9P032 175 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 NDRG4Q9ULP0 352 aaKnown RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF831Q5JPB2 1677 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 SLC31A1O15431 190 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 HCN1O60741 890 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 LATS1O95835 1130 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 SLC8B1Q6J4K2 584 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 C8orf82Q6P1X6 216 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 L3MBTL4Q8NA19 623 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 LCN9Q8WX39 176 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 TTLL2Q9BWV7 592 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 SLC6A16Q9GZN6 736 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 BTBD1Q9H0C5 482 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ENAMQ9NRM1 1142 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms