RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 TMEM248Q9NWD8 314 aa13.81□□□□□ -0.2
SYNGAP1-203ENST00000428982 PARP14Q460N5 1801 aa13.81□□□□□ -0.2
SYNGAP1-203ENST00000428982 NPEPPSL1A6NEC2 478 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 TRABD2BA6NFA1 517 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 PCDH17O14917 1159 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 LCMT2O60294 686 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 S100A2P29034 98 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 HOXC8P31273 242 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 SMAD3P84022 425 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 GRB7Q14451 532 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 GRIN2CQ14957 1233 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 SEC23BQ15437 767 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 TAF1AQ15573 450 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZNF648Q5T619 568 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 ANKRD33Q7Z3H0 272 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 DTWD1Q8N5C7 304 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 FATE1Q969F0 183 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 UBXN10Q96LJ8 280 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 GPR137Q96N19 417 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 GPR21Q99679 349 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 POLR2J2Q9GZM3 115 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 DNAJC15Q9Y5T4 150 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 HS3ST4Q9Y661 456 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 LOC105369274A0A096LPK9 316 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 SEC22BO75396 215 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 STC1P52823 247 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 ST8SIA6P61647 398 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 GPR33Q49SQ1 333 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 C9orf152Q5JTZ5 239 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 C11orf88Q6PI97 169 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 CERS6Q6ZMG9 384 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 GLCCI1Q86VQ1 547 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 CYP4Z1Q86W10 505 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 OR4N4Q8N0Y3 316 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 BADQ92934 168 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 MAGEH1Q9H213 219 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 ABCG5Q9H222 651 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 KLK4Q9Y5K2 254 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 ECI2O75521 394 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 STX11O75558 287 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 SIX3O95343 332 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 CSF3P09919 207 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 AP5B1Q2VPB7 878 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 NADSYN1Q6IA69 706 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 CFAP206Q8IYR0 622 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 TRMT61AQ96FX7 289 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 GAREM1Q9H706 876 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 BEX1Q9HBH7 125 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 ATP13A1Q9HD20 1204 aa13.8□□□□□ -0.2
SYNGAP1-203ENST00000428982 A0A0G2JMZ2 1700 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 C1RP00736 705 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 ESR1P03372 595 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 EMX2Q04743 252 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 SGO1Q5FBB7 561 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 OTUD1Q5VV17 481 aaPredicted RBP13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 TMEM88Q6PEY1 159 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 MACC1Q6ZN28 852 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 ARHGAP12Q8IWW6 846 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 GPR65Q8IYL9 337 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 GHDCQ8N2G8 530 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 OR8J3Q8NGG0 315 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZNF461Q8TAF7 563 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 TPD52L3Q96J77 140 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 KCNC2Q96PR1 638 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC38A3Q99624 504 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 PTDSS2Q9BVG9 487 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 GPR83Q9NYM4 423 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 CRLS1Q9UJA2 301 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 SAMD4AQ9UPU9 718 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 PADI2Q9Y2J8 665 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 ULK1O75385 1050 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 SFTPCP11686 197 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 PGGT1BP53609 377 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 POU4F2Q12837 409 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 HKDC1Q2TB90 917 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 ELP2Q6IA86 826 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 OR2T5Q6IEZ7 315 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 GALNT10Q86SR1 603 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 OR2T29Q8NH02 315 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 MYOCQ99972 504 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 RHNO1Q9BSD3 238 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 REEP4Q9H6H4 257 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 YIPF1Q9Y548 306 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 PQLC2LA1A4F0 135 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 CLCA1A8K7I4 914 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 SDC3O75056 442 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 KLHL18O94889 574 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 HAPLN1P10915 354 aaPredicted RBP13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 DNAJA1P31689 397 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 PPP3R1P63098 170 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 PAQR9Q6ZVX9 377 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 CDKN2AIPNLQ96HQ2 116 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 KCTD7Q96MP8 289 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 SFXN2Q96NB2 322 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 CASD1Q96PB1 797 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 TGIF2Q9GZN2 237 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 SHARPINQ9H0F6 387 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 CDCP1Q9H5V8 836 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 CSNK1G1Q9HCP0 422 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 EVLQ9UI08 416 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms