RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 ALPPP05187 535 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 PREPP48147 710 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 CSTF1Q05048 431 aaKnown RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 SF3A2Q15428 464 aaKnown RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 SIGIRRQ6IA17 410 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 SDE2Q6IQ49 451 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 IKBIPQ70UQ0 350 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 GATAD2BQ8WXI9 593 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 ZCCHC2Q9C0B9 1178 aaKnown RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 MCUBQ9NWR8 336 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 DIMT1Q9UNQ2 313 aaKnown RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 MANSC4A6NHS7 340 aaPredicted RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 FAM227AF5H4B4 570 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 APOL3O95236 402 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 ALDH1A1P00352 501 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 CKBP12277 381 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 C4BPBP20851 252 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 ZNF79Q15937 498 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 FAM214AQ32MH5 1076 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 TJAP1Q5JTD0 557 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 PDZD3Q86UT5 571 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 OR8H3Q8N146 312 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 IQCF1Q8N6M8 205 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 NEIL3Q8TAT5 605 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 ZNF431Q8TF32 576 aaPredicted RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 BTN2A2Q8WVV5 523 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 RAB8BQ92930 207 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 FCRL1Q96LA6 429 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 WRAP53Q9BUR4 548 aaKnown RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 BARHL1Q9BZE3 327 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 MOSPD1Q9UJG1 213 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC35F4A4IF30 521 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 PDPK1O15530 556 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 ZNF780AO75290 641 aaPredicted RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 C1GALT1C1LP0DN25 315 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 BUD31P41223 144 aaPredicted RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 KIR2DL3P43628 341 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 TGM4P49221 684 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 CCT3P49368 545 aaKnown RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 HYAL2Q12891 473 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 HSPB3Q12988 150 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 TMEM44Q2T9K0 475 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC36A4Q6YBV0 504 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 TRAPPC5Q8IUR0 188 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 DNAJA4Q8WW22 397 aaPredicted RBP10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC9A6Q92581 669 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 TMEM19Q96HH6 336 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 TAPBPLQ9BX59 468 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 ACOXLQ9NUZ1 547 aa10.25□□□□□ -0.77
ATP2C1-204ENST00000428331 MYO16Q9Y6X6 1858 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 NINQ8N4C6 2090 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 SERPIND1P05546 499 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 IL3P08700 152 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 ZNF30P17039 623 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 UQCRC1P31930 480 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 OCLNQ16625 522 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 TMEM220Q6QAJ8 160 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 RSPO2Q6UXX9 243 aaPredicted RBP10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 KCNN2Q9H2S1 579 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 SYNDIG1Q9H7V2 258 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 RC3H2Q9HBD1 1191 aaKnown RBP10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 NEUROD4Q9HD90 331 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 YIPF1Q9Y548 306 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 MMP20O60882 483 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 CELP19835 753 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 ITGB7P26010 798 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 SRP54P61011 504 aaKnown RBP10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 RRAS2P62070 204 aaPredicted RBP10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 LMAN2Q12907 356 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 GNA13Q14344 377 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 Q6ZVL8 140 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 OR52P1PQ8NH57 321 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 TMED9Q9BVK6 235 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 GTPBP2Q9BX10 602 aaKnown RBP10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 MYNNQ9NPC7 610 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 KLHL28Q9NXS3 571 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 CFAP97Q9P2B7 532 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 PIKFYVEQ9Y2I7 2098 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 TSPAN6O43657 245 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 PRAMEF4O60810 478 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 GALTP07902 379 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 FURINP09958 794 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 GIPRP48546 466 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 ZNF385BQ569K4 471 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 ESCO2Q56NI9 601 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 PRAMEF9Q5VWM5 478 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 C22orf39Q6P5X5 142 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 RFLNAQ6ZTI6 216 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 ASB18Q6ZVZ8 466 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 OTOP2Q7RTS6 562 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 RTN4RL1Q86UN2 441 aaPredicted RBP10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 OR5P2Q8WZ92 322 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 NEIL2Q969S2 332 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 ZBED6CLQ96FA7 236 aaPredicted RBP10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 LYSMD1Q96S90 227 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 POLDIP3Q9BY77 421 aaKnown RBP10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 SPRTNQ9H040 489 aaPredicted RBP10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 SPG21Q9NZD8 308 aa10.24□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC19A2O60779 497 aa10.23□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC43A1O75387 559 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms