RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 WSCD2Q2TBF2 565 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 TRIM60Q495X7 471 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SV2CQ496J9 727 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 KLHL22Q53GT1 634 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 NOXRED1Q6NXP6 359 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 TMIGD1Q6UXZ0 262 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 OR10G2Q8NGC3 310 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 FANK1Q8TC84 345 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 YIPF5Q969M3 257 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 RGMAQ96B86 450 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 HSH2DQ96JZ2 352 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 POLR1EQ9GZS1 481 aaKnown RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 IL17CQ9P0M4 197 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 GSTK1Q9Y2Q3 226 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SLC6A5Q9Y345 797 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 CSPG4Q6UVK1 2322 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 COL4A6Q14031 1691 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 ARPC4-TTLL3A0A0A6YYG9 625 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 ANKRD66B4E2M5 251 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SLC28A1O00337 649 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SLC28A2O43868 658 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 UGDHO60701 494 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 VIPP01282 170 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 LPOP22079 712 aaPredicted RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 MAOBP27338 520 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 HOXD9P28356 352 aaPredicted RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 CCND3P30281 292 aaPredicted RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 SYT14P1Q58G82 188 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 GPRC6AQ5T6X5 926 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 FGD2Q7Z6J4 655 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 RNF113BQ8IZP6 322 aaKnown RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 KRTCAP2Q8N6L1 136 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 OR6M1Q8NGM8 313 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 ADAMTS14Q8WXS8 1223 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 FOPNLQ96NB1 174 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 SEMA3CQ99985 751 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 ARHGAP9Q9BRR9 750 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 HMX1Q9NP08 348 aaPredicted RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 DLL4Q9NR61 685 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 NLE1Q9NVX2 485 aaPredicted RBP4.9□□□□□ -1.63
RIF1-203ENST00000428287 TMEM248Q9NWD8 314 aa4.9□□□□□ -1.63
RIF1-203ENST00000428287 COL4A2P08572 1712 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SUV39H1O43463 412 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 NDUFS3O75489 264 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 STK16O75716 305 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 IGLV3-27P01718 113 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ADRB1P08588 477 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 GPR85P60893 370 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ERVK-21P61565 698 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 WDR5P61964 334 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 ALDH6A1Q02252 535 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 FGL1Q08830 312 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SLC27A4Q6P1M0 643 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 IKBIPQ70UQ0 350 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 RNF180Q86T96 592 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 OR8D4Q8NGM9 314 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ACOT12Q8WYK0 555 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 CXorf40BQ96DE9 158 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 NXPE2Q96DL1 559 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SMARCD1Q96GM5 515 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 OR4K3Q96R72 315 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ACTR6Q9GZN1 396 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 PDGFCQ9NRA1 345 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 TAS2R16Q9NYV7 291 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 PIPOXQ9P0Z9 390 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 MPTX1A8MV57 137 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 H3BRB1 525 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SIGLEC6O43699 453 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ENTPD6O75354 484 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 RAD17O75943 681 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 ZNF280AP59817 542 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 RPL38P63173 70 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 BTN1A1Q13410 526 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 GTF2H2Q13888 395 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SLC36A2Q495M3 483 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 CRB2Q5IJ48 1285 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 GTF2H2CQ6P1K8 395 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 QSOX2Q6ZRP7 698 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 DGLUCYQ7Z3D6 616 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 C19orf18Q8NEA5 215 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 COQ10AQ96MF6 247 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 RSPO3Q9BXY4 272 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 CLEC4MQ9H2X3 399 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 UBQLN2Q9UHD9 624 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SLC6A14Q9UN76 642 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 PTPRZ1P23471 2315 aaPredicted RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 MFSD2BA6NFX1 497 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SCAMP3O14828 347 aaKnown RBP4.89□□□□□ -1.63
RIF1-203ENST00000428287 INPPL1O15357 1258 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 SGTAO43765 313 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 MMP10P09238 476 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 IFI30P13284 250 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 HSD3B1P14060 373 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 DNASE1P24855 282 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 HSD3B2P26439 372 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 HOXC8P31273 242 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 TSPY1Q01534 308 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 FCN2Q15485 313 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 MICBQ29980 383 aa4.89□□□□□ -1.63
RIF1-203ENST00000428287 VASNQ6EMK4 673 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms